AMCG00016011


Basic Information

Item Value
gene id AMCG00016011
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 90982 ~ 113565 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016011
ATGACTTTTTCAGACAATTTGTCAGGAGTTTCACCAGGATCCATATGGATATTCTCTCATGAAGCAACAGCCGAATTTCATACGGATTTCATCAACAATTTGAATGGATTCAGAGCAACATATGAAGCTGAAGATCTCCGCAGTCTTTCTAATGAGAATAAGATTAGCTGCTCTTTTGAAGAAGGGATGTGCTACTGGAAACAGGACCACCCCGATACTGAAGGCTGGATACGAGTCAGTGGGCCAACACTTCCCCCTTTCTCTGGACCCACGTTTGATCACACCTTTGGGAATCAGTCTGGATACTACATCGTCACACCAGGAGGCCCTGGTAACCAGATGAGAAACTTCAGGATTTTCAGTCTTCCATTAGATGCTGCAAATCAGCCTACTTGTCTGAACTTCTGGTACCATATGTATGGAAGTGATGTCTTCAGGCTGAGAGTTTCCACTTCTACAACACAGAGTGAAGCGAACATCATATTTGAGAAAGAGGGAAACTATGGTGATGACTGGCATTATGGGCAGGTCACACTGAATGACACTTCTGGCTCGATAATTGTTTTTGAAGCCCAGAAGAGCAGGGGTCTGAGAAATGATATAGCTCTGGATGACATACGGCTGTCAAATGGCCCATGTGTAGATGGAGTCCATCCAGAACCTACTCTTGTTCCAACACCAACCACCCCACCTGCACAACCCACTGACTGTGGTGGGCCATTTGAACTGTGGGAATCAAACTCTACTTTTAGCTCTCCTAATTAtccaaataattatatcaaCAATGCCTCCTGCATTTGGCATCTTCATGCAACTAGAGGCAAAAACATTAGGTTGCACTTCTTTGACTTTGAGTTGGAATCTATCCTGGATGTGGTGGAAGTCAGAGATGGATTGGATGATAACTCCACACTACTGGATGTTTATACTGGCCGAGGACCATTTGCAGATGTGATATCAACAACCAATCACATGACAGTGTTCTTCACAACTGACAGATCAGTAACCATGAAGGGATTCCATGCAAACTTCACCTCTGTTTCTCAAAGTGACAGGCCTGAGCCATGTGCTCCTGGTCTCTATCACTGTTCCTCTGGAGAATGCATATCAGACATAGATGTTTGTAATGGACACCTGGATTGTCCTGATGCTTCTGACGAGGCCAAGTGTGtgcaCCACGTGAATGATGGGAAAATGCAGCTCATGTTTCAGAATAAGTGGTACACAGTCTGTGGAGAGAATTGGTCTGGAGGTCTCTCTACATTTCTGTGTCAATATCTTGGGTTTCGaagTGGCAATGCAACATTGGTTCCCATTGTTAACAGAAATGATTCATTCATAACTGTTAGCCAGGCAGGGAATGGCAGTTTCGAGCTTACTCCCagCAGAAATGTCAACCCCATGGACTGGGAGGCGGTGATCGGGCTTCACTCACAGTTATCTTCTCATAACACAGTCCGACACATCGACCGCATTGTGATGGACCCCCGATACAACAAGAGAACAAAGGACAGTGACATTGTTTTGATGCACCTGGACTCAAAGGTGAACTTTACAGAGTACATTCAGCCAATTTGTCTTCCTGATATTGAGCAGCAGTTTCCAATGGGAAAGATGTGTTTCATAGCAGGGTGGGGAAGAATGGAAGAGCAAGgttcTTTGGCGAATATTTTACAAGAAGCTACACTACCTCTCATAACCAATGTGAAATGCCAACAGCGTATGCCTGAGTATACTATTACACCAAGGATGATGTGTGCTGGCTATGATGAAGGAGGAATTGACTCCTGCCAGGGGGACTCTGGAGGTCCTCTGATGTGCCTGGACAATGATAGATGGGTGCTCGCTGGTGTGACGTCTTTTGGCTATGGATGTGCTCGTCCAGAACGGCCCAGCGTATATGTCCGTGTCACAGAGTTTGTTGATTGGATAGAGGATACACATCACTAGACACAAAGGATTCGATTGGTTAATCCTATTTGCTCATGTTGGCAGCCATATAGTTTCTGTATACTTGGCGTGCATTATGTTTTGGATTTTCAGTGCACTACACATCACAATCAATGTCTTAGGAACATTTCTGAGAACTAAGCTTCATGTGTCTTCTGACTGCCTGTACTAACTGGTTCTTAAATCATCCAGGAGCTACTTTTTCTGAAGTGACTTTTGTTTCTTAcactaagggccggattaaatcaaaactttgacccacctgctaatagcaaactacaaacctgtacatcatagatGTACATACATCacatacatttatgattagaaaaattgtcatcttactaaaaatgaagccgcaactgattacagttctgtagttttctattagtggttgggtcaaagttttgatttaatctggccctaaatGTATTTCCTGCTGTTTGCAGAAAAATTGTTGTACATGTTAACATGATGCAATTCAGTCGGctctgattaaaaaacaaaaaaagacccTTATACTTATATGGCAATTAGGACTAAGGTGTATGTTATAATTCTGCtcttattgtattatatttcttgtCATAATTGGTAATGTATGAAACGGATGAAAACAATGCCTTAAAAAGATGCTGAAACAGTTTGTCAGATACTCTTTATTTCAACCACGCATAAGGATTAAGTCATATGTACAAATCACAATAACTttttactgaaaaaaacaagtcaaaaaGTATTACTACTAAATAGTGCAGTCTGACTCATGGCTTTACGTTTCTAGCAAGCACAgtcttaaaataacattttgtgacACATTCTTATTtgtaattctgttttaattctgttcatttttttttctctttaattatgCAAAATGCCCatgctctttttcttttttttttgtgaaatttTAAATTGTCTGACCTTATCTCATCTGGGATTTGAAATGCctttaatcttgttttttgtgtaagtCTTAATTACTTTAATCTATTTTCAAAGTTCAAATGAATTAATCTTTGCCTTAGCTCATTTACCCATTCCAGTTTGAACCCTTAACATTTCTAAGTagaatttcttattttaatgacTTTGAAGGCAGGAGgacaaatatactgtatatattttttaatttaagagtGCTGCAGAGCAGTGATGGTGGTTAGAAAGTGTTTAACACACTGATGCTTGTCGAGCTGATATAGTAAACCTAATttctatttagattttttttattgttattctgtctctcactgttaaaatacacctaccattaaaattatagactgataatttctttgtcagttggcaaacgtacaaaatcagcaggggatcagatacttttttccttcactgtatcaGCAGACAATTAGTGTTATAGAGAGCTGTATGCTCATTCTTAATGTAAAGCCTTGAGGTAAAGTCACACTTACAATATATACAAGTGTGGAGCTGAACACATACTAGGTGAAGAATGTGAAAGTAAGTGTGCCCAATGCATATTACCAACTGTATGCAAATGTTTAgttcagatttgtttattttgccttGATTCAATCATTTTCACAGGGGATCTCCCATTGACAGGATGTACACTTTCCCTTAGCAACTTACCAGGATTGTAATTTGTATCAGCTTCTGAAATGAACACCAGTAAATTCTCAATTGCAgcttatttgaaacaatatggaatataatgaaaacaaatatgctttATTCTGGTATGtgcttttcttgtatttgttaatatgcTAAGGTTTTTATGGTTTCCTTCAGGCATGTACTGATAAAGAGGAAAAAGTCTAAATGGAACAATTATGGCAGAATGTAACTGGAACCTTAACATATCATGCGTTACCTCAAAATGAGACACCCTTAATATCCTGTTTAACTATGAAAGGAGAAAGCATGTGTGGTTCTTTAAAACTTTTGCAGTACATAATTGAGCTTTGTTAAACAATATGTCCTTTTATCCAACAAAAACATACTTACAGCCATAACAATAAAGTGGAAAATAGTTTGCATGCATGAGTTTTTCTTTAAGGACGATTTGTTTAGACAGCCGTACACTATTAAACCACAGACTCTGTGCCTGGTCATACGAGTTAATGATCTTTCAAATTTCACAAGTCTCTGCCCTAAATGATCTGGCTTATCAGTAAGACAGCCTTCGTTATACCCTGTGTTTTTTAGGGCTTGTGTTCTGATACCATTCTCATGACTTTGTTGGTAGGTAAAGCATCACTTGGATAAAAGtctagtgttttgtttttgttgttttttgtttttgtgatttcaAGGTTACACTTCCatgctgttttctttcttggatGTCTTTGATATCCAGAGCGTTGACTGGTTCGGATTGGTTTTCGTCCGAGGTTTGctataaaaaagaaaccaattGGACTCAAAATCTGTATCATCTGTGCGtcattgttattaaaattaaaggaCATTCGGAAATCATTCTGTGACCCCATGAACGGCTtgcaaataaagaacaaaagacT

Function

GO: NA

KEGG:

id description
K01316 TMPRSS15, PRSS7; enterokinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016011 True 4466 mRNA 0.39 15 90982 113565

Neighbor

gene id symbol gene type direction distance location
AMCG00016013 NA coding upstream 36036 149601 ~ 153973 (-)
AMCG00016012 NA coding upstream 46141 159706 ~ 181537 (-)
AMCG00016010 NA coding upstream 73514 187079 ~ 196898 (-)
AMCG00016018 NA coding upstream 1149970 1263535 ~ 1312085 (-)
AMCG00016020 robo1 coding upstream 1200214 1313779 ~ 1341211 (-)
G10214 NA non-coding upstream 86714 200279 ~ 201116 (-)
G10229 NA non-coding upstream 157356 270921 ~ 271523 (-)
G10233 NA non-coding upstream 209064 322629 ~ 323000 (-)
G10298 NA non-coding upstream 1419836 1533401 ~ 1533655 (-)
G10307 NA non-coding upstream 1583240 1696805 ~ 1705596 (-)
AMCG00016024 ilk,LOC106581335 other upstream 2419052 2532617 ~ 2554946 (-)
G10420 LOC101154678 other upstream 2596834 2710399 ~ 2710685 (-)
AMCG00016029 NA other upstream 2670560 2784125 ~ 2846357 (-)
G10478 NA other upstream 2920857 3034422 ~ 3035183 (-)
AMCG00016046 NA other upstream 3415277 3528842 ~ 3542536 (-)

Expression


Co-expression Network