AMCG00016016 (LOC106613191)


Basic Information

Item Value
gene id AMCG00016016
gene name LOC106613191
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 789186 ~ 799369 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016016
ATGACACTCATTATGTACGACGAGGGTCAAGATAAGGAGGACTCCCCGCCCCGGATCGTGGAGCACCCGTCTGACCTGATCGTGTCCAAGGGGGAGCCGGCCACCCTCAACTGCAAGGCGGAGGGCCGGCCCAGCCCCACGGTGGAGTGGTACAAGGACGGGGAACGGGTGGAGACGGACAAGGATGACCCACGCTCTCACCGCATGCTGCTGCCCAGCGGCTCGCTCTTCTTCCTGCGCATCGTGCACGGCCGCCGCAGCAAGCCAGATGAGGGCAGCTACGTGTGCGTCGCCCGCAACTACCTTGGGGAGGCCGTCAGCCACAACGCGTCCCTGGAGGTGGCCTCGCTGAACGTCTCCTGA

Function

NR:

description
PREDICTED: roundabout homolog 2-like isoform X13

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016016 True 363 mRNA 0.65 3 789186 799369

Neighbor

gene id symbol gene type direction distance location
AMCG00016014 NA coding upstream 519266 257227 ~ 269920 (+)
AMCG00016009 zgc:112408,LOC107590289,LOC107666604,LOC107705181,LOC107721840 coding upstream 567302 205890 ~ 221884 (+)
AMCG00016008 NA coding upstream 696336 69832 ~ 92850 (+)
AMCG00016017 robo2 coding downstream 156279 955648 ~ 996162 (+)
AMCG00016015 NA coding downstream 210419 1009788 ~ 1035222 (+)
AMCG00016021 NA coding downstream 1372340 2171709 ~ 2369480 (+)
AMCG00016025 NA coding downstream 1773200 2572569 ~ 2596847 (+)
AMCG00016034 NA coding downstream 2136586 2935955 ~ 2946364 (+)
G10234 NA non-coding upstream 440291 348522 ~ 348895 (+)
G10230 NA non-coding upstream 473230 294121 ~ 315956 (+)
G10218 NA non-coding upstream 546104 225223 ~ 243082 (+)
G10185 NA non-coding upstream 588184 200290 ~ 201002 (+)
G10263 NA non-coding downstream 398260 1197629 ~ 1197883 (+)
G10342 NA non-coding downstream 1451057 2250426 ~ 2250627 (+)
G10345 NA non-coding downstream 1457944 2257313 ~ 2257732 (+)
G10352 NA non-coding downstream 1567262 2366631 ~ 2416786 (+)
G10356 NA non-coding downstream 1625716 2425085 ~ 2425481 (+)
G10350 NA other downstream 1513229 2312598 ~ 2313159 (+)
G10371 LOC105010782,LOC106603266 other downstream 1686173 2485542 ~ 2487751 (+)
AMCG00016030 NA other downstream 1959978 2759347 ~ 2812231 (+)
G10739 foxo1 other downstream 3627777 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 5842289 6641658 ~ 6661668 (+)

Expression


Co-expression Network