AMCG00016021


Basic Information

Item Value
gene id AMCG00016021
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 2171709 ~ 2369480 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016021
ATGTCCTCAAGTGATTCACTCAGCACGTCATCATCTGAGACATCCTCCAGCAAACACAGAAAGAAgttgaaaagaaagaacaaagagaaacaTGACAAAGTCTGGAGGAGAGgGATCCCCATAGCACCTCTGGATTCACGGAACTGCGCTGCATCACCAGGAGGTCAGATGAAATGCAAAACTATGGAATACACCAAAAACAAGGCAGTATGTGCACTGCTGAATGGCAATGGTCACCAAGAGAAAGacagaCAAGTTCATAACGTAGTTTATTACACACTAGATCCACGCttggaagaagagaaaagacagGACACCTACACCACCGTGGCAGCAGAGGCAGGACGGATTTCTCAGAATTGCAGCGATGACAAGGCAGTGTGCCAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016021 True 390 mRNA 0.46 6 2171709 2369480

Neighbor

gene id symbol gene type direction distance location
AMCG00016015 NA coding upstream 1136487 1009788 ~ 1035222 (+)
AMCG00016017 robo2 coding upstream 1175547 955648 ~ 996162 (+)
AMCG00016016 LOC106613191 coding upstream 1372340 789186 ~ 799369 (+)
AMCG00016014 NA coding upstream 1901789 257227 ~ 269920 (+)
AMCG00016009 zgc:112408,LOC107590289,LOC107666604,LOC107705181,LOC107721840 coding upstream 1949825 205890 ~ 221884 (+)
AMCG00016025 NA coding downstream 203089 2572569 ~ 2596847 (+)
AMCG00016034 NA coding downstream 566475 2935955 ~ 2946364 (+)
AMCG00016031 NA coding downstream 628386 2997866 ~ 2998285 (+)
AMCG00016032 NA coding downstream 629203 2998683 ~ 3054898 (+)
AMCG00016033 NA coding downstream 685528 3055008 ~ 3060444 (+)
G10263 NA non-coding upstream 973826 1197629 ~ 1197883 (+)
G10234 NA non-coding upstream 1822814 348522 ~ 348895 (+)
G10230 NA non-coding upstream 1855753 294121 ~ 315956 (+)
G10218 NA non-coding upstream 1928627 225223 ~ 243082 (+)
G10185 NA non-coding upstream 1970707 200290 ~ 201002 (+)
G10356 NA non-coding downstream 55605 2425085 ~ 2425481 (+)
G10372 NA non-coding downstream 119281 2488761 ~ 2489684 (+)
G10389 NA non-coding downstream 172244 2541724 ~ 2543612 (+)
G10419 LOC101154678 non-coding downstream 340933 2710413 ~ 2710752 (+)
G10421 NA non-coding downstream 345264 2714744 ~ 2716077 (+)
G10371 LOC105010782,LOC106603266 other downstream 116062 2485542 ~ 2487751 (+)
AMCG00016030 NA other downstream 389867 2759347 ~ 2812231 (+)
G10739 foxo1 other downstream 2057666 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 4272178 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 4294606 6664086 ~ 6665548 (+)

Expression


Co-expression Network