AMCG00016031


Basic Information

Item Value
gene id AMCG00016031
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 2997866 ~ 2998285 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016031
ATGCTGGATTCCATACTGCATCAGCATGAGGAAATCTCCACATTACTGGTGACCAATAACCAGTATGAAAGAATTGTGCAGATCAATGCAAACACTTTGAAAACAGTGGTTGCGTTCCTCAAGTTATTCAAGGATGCTACTAATGACCTCGAGTCTGACAACTccactcccagcacatcacttGCGCTGCAGTGGTCCGTCAGACTCATTGAACACTGCCAAGCAGCATCCCTCGATCCCTTGCTCTCCGAAGTCACCAGTGTATGTGCCTCACGTCTGGAAGAACTGATGGACACTAGTGACACATCAGCAAAACCCCTCCACATGATGTACAGGATTGCAACGCTCCTGACCCCTAAAATGCAATTGCTACGGATGATGGGCTTAGATGCAAGAGACGACGTGGTCAAAGGTGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016031 True 420 mRNA 0.48 1 2997866 2998285

Neighbor

gene id symbol gene type direction distance location
AMCG00016034 NA coding upstream 51502 2935955 ~ 2946364 (+)
AMCG00016025 NA coding upstream 401019 2572569 ~ 2596847 (+)
AMCG00016021 NA coding upstream 628386 2171709 ~ 2369480 (+)
AMCG00016015 NA coding upstream 1962644 1009788 ~ 1035222 (+)
AMCG00016017 robo2 coding upstream 2001704 955648 ~ 996162 (+)
AMCG00016032 NA coding downstream 398 2998683 ~ 3054898 (+)
AMCG00016033 NA coding downstream 56723 3055008 ~ 3060444 (+)
AMCG00016036 NA coding downstream 149503 3147788 ~ 3164940 (+)
AMCG00016037 NA coding downstream 190414 3188699 ~ 3189951 (+)
AMCG00016035 NA coding downstream 252402 3250687 ~ 3259152 (+)
G10431 NA non-coding upstream 261390 2736172 ~ 2736476 (+)
G10423 NA non-coding upstream 280683 2716886 ~ 2717183 (+)
G10421 NA non-coding upstream 281789 2714744 ~ 2716077 (+)
G10419 LOC101154678 non-coding upstream 287114 2710413 ~ 2710752 (+)
G10389 NA non-coding upstream 454254 2541724 ~ 2543612 (+)
G10479 NA non-coding downstream 37899 3036184 ~ 3036419 (+)
G10487 NA non-coding downstream 97691 3095976 ~ 3096205 (+)
G10528 NA non-coding downstream 282126 3280411 ~ 3281165 (+)
G10547 NA non-coding downstream 373266 3371551 ~ 3371894 (+)
G10560 NA non-coding downstream 439789 3438074 ~ 3443096 (+)
AMCG00016030 NA other upstream 185635 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 510115 2485542 ~ 2487751 (+)
G10350 NA other upstream 684707 2312598 ~ 2313159 (+)
G10739 foxo1 other downstream 1428861 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 3643373 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 3665801 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 4023862 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 4271570 7269855 ~ 7302042 (+)

Expression


Co-expression Network