AMCG00016033


Basic Information

Item Value
gene id AMCG00016033
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 3055008 ~ 3060444 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016033
ATGCTCAATGACCACTTAAAAGTAATCGAGTGGACTTACTGGCGTGGTGACAAACGTAAAAATGGCCCCCTGGGTATGATTTTGCATGACATTAGAAGGAAGTATCCTCCAAAGCGCAAGTTGAAGCAACAACACAAGCAGCAGGAGTCCATTCCGGAGAGCTCCAAAGATGCAACACCTAATGATCTGGAGGAAAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016033 True 201 mRNA 0.44 2 3055008 3060444

Neighbor

gene id symbol gene type direction distance location
AMCG00016032 NA coding upstream 110 2998683 ~ 3054898 (+)
AMCG00016031 NA coding upstream 56723 2997866 ~ 2998285 (+)
AMCG00016034 NA coding upstream 108644 2935955 ~ 2946364 (+)
AMCG00016025 NA coding upstream 458161 2572569 ~ 2596847 (+)
AMCG00016021 NA coding upstream 685528 2171709 ~ 2369480 (+)
AMCG00016036 NA coding downstream 87344 3147788 ~ 3164940 (+)
AMCG00016037 NA coding downstream 128255 3188699 ~ 3189951 (+)
AMCG00016035 NA coding downstream 190243 3250687 ~ 3259152 (+)
AMCG00016038 NA coding downstream 280221 3340665 ~ 3364028 (+)
AMCG00016039 NA coding downstream 390971 3451415 ~ 3485934 (+)
G10479 NA non-coding upstream 18589 3036184 ~ 3036419 (+)
G10431 NA non-coding upstream 318532 2736172 ~ 2736476 (+)
G10423 NA non-coding upstream 337825 2716886 ~ 2717183 (+)
G10421 NA non-coding upstream 338931 2714744 ~ 2716077 (+)
G10419 LOC101154678 non-coding upstream 344256 2710413 ~ 2710752 (+)
G10487 NA non-coding downstream 35532 3095976 ~ 3096205 (+)
G10528 NA non-coding downstream 219967 3280411 ~ 3281165 (+)
G10547 NA non-coding downstream 311107 3371551 ~ 3371894 (+)
G10560 NA non-coding downstream 377630 3438074 ~ 3443096 (+)
G10584 NA non-coding downstream 458444 3518888 ~ 3519591 (+)
AMCG00016030 NA other upstream 242777 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 567257 2485542 ~ 2487751 (+)
G10350 NA other upstream 741849 2312598 ~ 2313159 (+)
G10739 foxo1 other downstream 1366702 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 3581214 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 3603642 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 3961703 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 4209411 7269855 ~ 7302042 (+)

Expression


Co-expression Network