AMCG00016034


Basic Information

Item Value
gene id AMCG00016034
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 2935955 ~ 2946364 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016034
GAGCCCAAGGTGTATGTGTCAGCTGGCTCAGCCCCACTGATCGATGGGGGGAACGAGACAGTGGTGGCCATCTGCACAGCTGAGAAGGGGAAACCCATGGCTGAGGTGTCCTGGGAGACGGACCTCTTTGGACACTCTGAAAGGAAGGTCATTGATGAGCCCAACGACACCATCACCATGGAGATGCAGTACAGGTGGGTGCCCACCCGCTTCCAGAGGGACCGCAAGCTGACCTGTGTGGTACGACACCCAGCGCTGGAGACGGAGCTAGGTGACGAGTTGCCAGCAGGTGTGCAAATAGTGAATGACACCTTAGTGTTCAGCAGAGCACTGGAGCGCAATGACTCGGGGGTGTATAGATGCGAAGTGGCAAACGATATTGGACATCAGGCTAAACAGAGGGAGATCCGAATCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016034 True 417 mRNA 0.56 2 2935955 2946364

Neighbor

gene id symbol gene type direction distance location
AMCG00016025 NA coding upstream 339108 2572569 ~ 2596847 (+)
AMCG00016021 NA coding upstream 566475 2171709 ~ 2369480 (+)
AMCG00016015 NA coding upstream 1900733 1009788 ~ 1035222 (+)
AMCG00016017 robo2 coding upstream 1939793 955648 ~ 996162 (+)
AMCG00016016 LOC106613191 coding upstream 2136586 789186 ~ 799369 (+)
AMCG00016031 NA coding downstream 51502 2997866 ~ 2998285 (+)
AMCG00016032 NA coding downstream 52319 2998683 ~ 3054898 (+)
AMCG00016033 NA coding downstream 108644 3055008 ~ 3060444 (+)
AMCG00016036 NA coding downstream 201424 3147788 ~ 3164940 (+)
AMCG00016037 NA coding downstream 242335 3188699 ~ 3189951 (+)
G10431 NA non-coding upstream 199479 2736172 ~ 2736476 (+)
G10423 NA non-coding upstream 218772 2716886 ~ 2717183 (+)
G10421 NA non-coding upstream 219878 2714744 ~ 2716077 (+)
G10419 LOC101154678 non-coding upstream 225203 2710413 ~ 2710752 (+)
G10389 NA non-coding upstream 392343 2541724 ~ 2543612 (+)
G10479 NA non-coding downstream 89820 3036184 ~ 3036419 (+)
G10487 NA non-coding downstream 149612 3095976 ~ 3096205 (+)
G10528 NA non-coding downstream 334047 3280411 ~ 3281165 (+)
G10547 NA non-coding downstream 425187 3371551 ~ 3371894 (+)
G10560 NA non-coding downstream 491710 3438074 ~ 3443096 (+)
AMCG00016030 NA other upstream 123724 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 448204 2485542 ~ 2487751 (+)
G10350 NA other upstream 622796 2312598 ~ 2313159 (+)
G10739 foxo1 other downstream 1480782 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 3695294 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 3717722 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 4075783 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 4323491 7269855 ~ 7302042 (+)

Expression


Co-expression Network