AMCG00016036


Basic Information

Item Value
gene id AMCG00016036
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 3147788 ~ 3164940 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016036
CGACCAGAAGTGAGTATTGAAGCTGTGCTGGAAGAGGAGAATGGTTTTCAATATCAGTCAGTCAGGTGTTCTGCCTCCAATGCCAAACCAGCAGCAAATATTACTCTGATGAACAGCAGTCTTTTTCCCCCTGACCTGACTTCCATGGAGACGGAGATGCATACAAACCCAAATGGCACAATGACCCAAACCACTGTGTACAGGTTCCCCACCTCCTTACAAGATCAAGACACTGTGAGTTGTGTGATTGAACACCCGGCTTTTGTAGATGCAGTGAAGCTGAAAGTAAGAGTCAACACTTACGTTGTCCCAGACATGACCATTGAAACCAACATGActtgtgaaaatgaaacagaGTTTCGCGAGGTCAAATGCAAAGCAGTTAAAGGTAGACCAGCTGCTACTATCACGTGGCTTGGAATCAACCTGGGAGACATTAGGGAAATTGTTGAAAAGGACAATGATACAGAGACAGTTACCAGCATCTACCGCTTCCTGCCAAATCTTCACGAGGGAGAAAACATCTCCTGTGTGATAACCCACCCCAAAAATTCAACGCatgaagtgaaaacaatatCCCTGCCTGTTTATTACCTCTCATCTATATATGTGCTAAATGCGGAAGtgacaaacacaaaacatgccGTGGAAAAGGAGATCCTGTACAGAGTGGTGCTGGAAGCAGGACAACAAAACCAGACCATTCCACTGCAAGTGTCTGGGAATGTGCCACATTATGAAGTGAAGTGCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016036 True 753 mRNA 0.45 3 3147788 3164940

Neighbor

gene id symbol gene type direction distance location
AMCG00016033 NA coding upstream 87344 3055008 ~ 3060444 (+)
AMCG00016032 NA coding upstream 92890 2998683 ~ 3054898 (+)
AMCG00016031 NA coding upstream 149503 2997866 ~ 2998285 (+)
AMCG00016034 NA coding upstream 201424 2935955 ~ 2946364 (+)
AMCG00016025 NA coding upstream 550941 2572569 ~ 2596847 (+)
AMCG00016037 NA coding downstream 23759 3188699 ~ 3189951 (+)
AMCG00016035 NA coding downstream 85747 3250687 ~ 3259152 (+)
AMCG00016038 NA coding downstream 175725 3340665 ~ 3364028 (+)
AMCG00016039 NA coding downstream 286475 3451415 ~ 3485934 (+)
AMCG00016040 NA coding downstream 416740 3581680 ~ 3586657 (+)
G10487 NA non-coding upstream 51583 3095976 ~ 3096205 (+)
G10479 NA non-coding upstream 111369 3036184 ~ 3036419 (+)
G10431 NA non-coding upstream 411312 2736172 ~ 2736476 (+)
G10423 NA non-coding upstream 430605 2716886 ~ 2717183 (+)
G10421 NA non-coding upstream 431711 2714744 ~ 2716077 (+)
G10528 NA non-coding downstream 115471 3280411 ~ 3281165 (+)
G10547 NA non-coding downstream 206611 3371551 ~ 3371894 (+)
G10560 NA non-coding downstream 273134 3438074 ~ 3443096 (+)
G10584 NA non-coding downstream 353948 3518888 ~ 3519591 (+)
G10627 NA non-coding downstream 612136 3777076 ~ 3821028 (+)
AMCG00016030 NA other upstream 335557 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 660037 2485542 ~ 2487751 (+)
G10350 NA other upstream 834629 2312598 ~ 2313159 (+)
G10739 foxo1 other downstream 1262206 4427146 ~ 4428059 (+)
AMCG00016079 NA other downstream 3476718 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 3499146 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 3857207 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 4104915 7269855 ~ 7302042 (+)

Expression


Co-expression Network