AMCG00016061


Basic Information

Item Value
gene id AMCG00016061
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 4495818 ~ 4499954 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016061
aattaaaataataataattgtctttCACAATCCACTTCTAAATAAGAATTCGAGGAATGAAGGAGGTGATGCAACCTTCTCTTCTGGCCATAATCTGCAACATCTGGAACATCTGGAGCGGAGggcacatataaataaaaaatgtaatagagaAAGTATGTATTTCGCACTCGTGGAGTACCCGGACATTGCCTTTCACTAAACTGCGTGTCTTTCTGGTAAAATCAAGACAGGGTGTGTGAGGCAGGGACATGTTGTCGCTGATGCTGGTTCTGCTCTTCGTGCGCCAAACTGCAGCTGCGCACCGACTGTCACTGAAGACCCTGAGAgaaaactactactacttccCAGAGAATCGCAcgttcaaacaaaacaagtccAGAGACCTTGCTCAGCAACCCACAATGCTGCCCACCACAGGAGGAAACCTCATTGTATATGACCAGGACTGCTCCATGCTGTATGACAGACAGAAGGCCTCCAGCGGGTTCTATCGGATCAAGCCCAGATCAGCGATGGAGCCCTTCCTGGTGTACTGTGACATGACGGATGGGGGAGGGTGGACCGTGATCCAGCAGAGACGCAACGGGAAAGTGGATTTTAACCGGTACACTGCAACTTATCCTTGTTCTCATTCACTCATTCACCTGCAGCCTGGCTGATTGAAGTGATATATTTCCACTCACGCTGGCCAGGAGAGATCACCCATGCCATTACACTTGCCAGTTAACATCTCAGAGAGCAGAGGTGACAGTCTCTATTTATTGCAATTAGGGTAACATCAgtaaagtctctctctctccctctcccctgcaTCATGTGAAAGATAGTCCTAttgctaaaaaaatatatgtgcagTATATTAACAAAACTGTATTGCTAAGCAAAGAAAGGACTTGATACACTTGCAAGCCCTTTGACAATAAGTCCTTGAGAGATGCATATTTACTGAgattacaatgtaattatgcTGCCAAATTAATGTTGACAGGCTACTGATTCTAAACTTTGAATGAACAAGCTGATGGTAGAATGTGGTAGTGACTTATTAAAGCTTATCTTTTCTCTAGAAAATGGAGTGATTATAAAGACGGATTTGGGAATTATAAAAGAAGCAATGATGAGTACTGGCTGGGAAACGAAAACATCTACATGCTTCTCCTGGGTGGtaaaaatcagtttatttcTCTTGCCagaatattaacatattaaaagtGACTTACTCTGTAAAACTAGTAATAGATTTGATTCTGAAACTATATAGCAAATTGGCAATCTAACACTGTCCTTTTCCCTTTGTGatatttgactgttttgtttacaaacaaaaggaggctattcaacccatcgtgctcgtttggtgtccaaggatcctatccagtctatttttgaatgttcccaaattctcagtttcaaccacatcacttgggagtttgttcagattgtgacgactctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaatttccatttgtgtccccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016061 True 1524 mRNA 0.42 4 4495818 4499954

Neighbor

gene id symbol gene type direction distance location
AMCG00016060 NA coding upstream 18480 4470062 ~ 4477338 (+)
AMCG00016055 cog6 coding upstream 290504 4201763 ~ 4205314 (+)
AMCG00016056 cog6,LOC102796367 coding upstream 306862 4160355 ~ 4188956 (+)
AMCG00016057 cog6,LOC107740391,LOC107561480,LOC107670561 coding upstream 366940 4126490 ~ 4128878 (+)
AMCG00016051 LOC107671632 coding upstream 529632 3949181 ~ 3966186 (+)
AMCG00016067 proser1,LOC107556855 coding downstream 32370 4532324 ~ 4553950 (+)
AMCG00016066 stoml3b,stoml3,LOC103043838,LOC107556874,LOC108444492,LOC107720596,LOC103140675 coding downstream 70237 4570191 ~ 4576419 (+)
AMCG00016076 NA coding downstream 548254 5048208 ~ 5108992 (+)
AMCG00016077 NA coding downstream 1872445 6372399 ~ 6487517 (+)
AMCG00016080 NA coding downstream 2170352 6670306 ~ 6679037 (+)
G10737 NA non-coding upstream 118155 4376307 ~ 4377663 (+)
G10736 NA non-coding upstream 122097 4371487 ~ 4373721 (+)
G10732 NA non-coding upstream 159514 4336041 ~ 4336304 (+)
G10707 NA non-coding upstream 286173 4209381 ~ 4209645 (+)
G10695 NA non-coding upstream 516721 3977559 ~ 3979097 (+)
G10798 NA non-coding downstream 85280 4585234 ~ 4585486 (+)
G10794 NA non-coding downstream 86594 4586548 ~ 4587637 (+)
G10853 NA non-coding downstream 407852 4907806 ~ 4912418 (+)
G10939 NA non-coding downstream 1341274 5841228 ~ 5841821 (+)
G11021 LOC107718733,LOC107555187 non-coding downstream 2235656 6735610 ~ 6744358 (+)
G10739 foxo1 other upstream 67759 4427146 ~ 4428059 (+)
AMCG00016030 NA other upstream 1683587 2759347 ~ 2812231 (+)
G10371 LOC105010782,LOC106603266 other upstream 2008067 2485542 ~ 2487751 (+)
G10350 NA other upstream 2182659 2312598 ~ 2313159 (+)
AMCG00016079 NA other downstream 2141704 6641658 ~ 6661668 (+)
G10981 cct8,LOC107693911 other downstream 2164132 6664086 ~ 6665548 (+)
AMCG00016091 NA other downstream 2522193 7022147 ~ 7024851 (+)
AMCG00016103 NA other downstream 2769901 7269855 ~ 7302042 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other downstream 2946496 7446450 ~ 7478586 (+)

Expression


Co-expression Network