Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016090 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 6831122 ~ 6833591 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016090 | True | 576 | mRNA | 0.51 | 2 | 6831122 | 6833591 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016089 | NA | coding | downstream | 1600 | 6816726 ~ 6829522 (-) |
| AMCG00016083 | LOC106581501,LOC107558811,LOC105006673,LOC107670116 | coding | downstream | 43613 | 6783537 ~ 6787509 (-) |
| AMCG00016087 | grik1b,grik1,LOC105006673 | coding | downstream | 58028 | 6735946 ~ 6773094 (-) |
| AMCG00016084 | cct8,LOC107693911,LOC107701129 | coding | downstream | 162110 | 6647307 ~ 6669012 (-) |
| AMCG00016081 | NA | coding | downstream | 190585 | 6637332 ~ 6640537 (-) |
| AMCG00016082 | NA | coding | upstream | 14215 | 6847806 ~ 6861382 (-) |
| AMCG00016085 | NA | coding | upstream | 41855 | 6875446 ~ 6897876 (-) |
| AMCG00016088 | sod1 | coding | upstream | 119021 | 6952612 ~ 6958966 (-) |
| AMCG00016094 | scaf4 | coding | upstream | 126456 | 6960047 ~ 6989921 (-) |
| AMCG00016093 | NA | coding | upstream | 182371 | 7015962 ~ 7020428 (-) |
| G10956 | NA | non-coding | downstream | 607893 | 6222863 ~ 6223229 (-) |
| G10952 | NA | non-coding | downstream | 941206 | 5889588 ~ 5889916 (-) |
| G10940 | NA | non-coding | downstream | 989418 | 5841477 ~ 5841704 (-) |
| G10935 | NA | non-coding | downstream | 1079788 | 5750918 ~ 5751334 (-) |
| G10934 | NA | non-coding | downstream | 1084555 | 5746336 ~ 5746567 (-) |
| G11215 | NA | non-coding | upstream | 786107 | 7619698 ~ 7619997 (-) |
| G11216 | NA | non-coding | upstream | 787049 | 7620640 ~ 7620853 (-) |
| G11243 | NA | non-coding | upstream | 1038826 | 7872417 ~ 7872769 (-) |
| G11247 | NA | non-coding | upstream | 1133480 | 7967071 ~ 7967305 (-) |
| G11288 | NA | non-coding | upstream | 1260209 | 8093800 ~ 8095204 (-) |
| AMCG00016074 | NA | other | downstream | 1901222 | 4903856 ~ 4929900 (-) |
| AMCG00016049 | NA | other | downstream | 2910619 | 3886298 ~ 3920503 (-) |
| AMCG00016046 | NA | other | downstream | 3288586 | 3528842 ~ 3542536 (-) |
| G10478 | NA | other | downstream | 3795939 | 3034422 ~ 3035183 (-) |
| AMCG00016029 | NA | other | downstream | 3984765 | 2784125 ~ 2846357 (-) |
| AMCG00016110 | ufm1,LOC107701138 | other | upstream | 847320 | 7680911 ~ 7753437 (-) |
| AMCG00016119 | NA | other | upstream | 1285630 | 8119221 ~ 8124033 (-) |
| G11326 | NA | other | upstream | 1357955 | 8191546 ~ 8194432 (-) |
| AMCG00016134 | NA | other | upstream | 1989954 | 8823545 ~ 8827760 (-) |
| AMCG00016176 | NA | other | upstream | 4000821 | 10834412 ~ 10847811 (-) |
