AMCG00016093


Basic Information

Item Value
gene id AMCG00016093
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 7015962 ~ 7020428 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016093
ACAGCAGTCACAACGCGCAGGCCCGGCTCTGACGCACTTCCGCTTCCCgctctgttttgtatttcaaaccCGATGGCGGGGCTTGGTATCGGAGCCGGGAAAGCGCTTTCAGCGAGGATTGACCGCAGAATGGACGATGACTCGGCCACGATGTTGAAGGAGTGTAACGcaggcgaggaggaggaggaagaggaggacgaAGATGACAATGTGCCCCCGGTGGTGTTTCTGTGCGTGAAGTGCAAGGTCGCTCTCGGAGACTCGTTGGCCTGGGTGGGCAGCGAGGACGAGCAGAATCTGATCCTGCTGACGCGTGCCACTGACAACGTGTGTGTGGGCAATGAGCACTTTGTCTCCAGGATGCCCAAGGAAAGTGGCTGCCTCcttttaaatctgtattgtCGTGGCTGCTCTCTTCAGCTGGGCAAGATGTACACCTCTACCCCCAAGAATTTAGACTACAAGAGATCACTCTTCTGCCTGAGCATTGAACAAGTGGAAAGCTATGTGTTAGGCTCCACCACACAGAAGATTTGCCCAGAGGATGAGGATGAACCAGTAACTCTGGAGCACAGAGTGTATTTAGAGCATGAGATTGAAAAGGTCAAGGCTGTTGTGGTTTCAGTGGAACAAAGATTGTCAGAAATCGAATCAAAACTCCTTAAAAAAGCACAGTAATCACAGATTCATCTTATTTTCCACTAAATAATTGTGTACCCCCTCATGGGTTAAACCAGTCTAGCTCGGAACCAGTGCTGTTATCACAAAAGGCTTTAACTGGGTGAGCTATTCAGGAGTTCtgcagatgtatttatatatatatatatatatattgtttgtatcACAGTTGTATATCAAGTTTGTAATCtctgttttgttatgttttacagtatttgtttgATATCCAAACAGTTGATcctcagaaatgtaaatatttttttttttcctctgctgtCAGAGGCACAATTAGAATATATACCTGTCGTGCCTTTTTGGCCTTTGTTGTAATAAAACGCCGCCGCAGTATTTGGATGTGTGCTGCTGTAGTTTTTCTATAATGTAGGGTCCAGTATCATCCCAGTCTTTATCCTAGTGCACAGCTAGCTGCAGAGATTGTATGCCGTTTTATTGATTTGTCTTTTGAGGTGAATGGGGTTCAGTTTGTTAAAGGTTTGtggtaaaacaacaaaaggtaAATGAATATGGGGATcctaaaatgtttaaatcaataaatggcAGGGTtcttctaaaaatgtaatttgtagtattttctttatctgtaaAAAAGATTCTGTTTgtgatgtgaaaataaatgtaattcacagtgaaataaatgttattcccata

Function

GO: NA

KEGG:

id description
K11564 MIS18, FASP1; kinetochore protein Mis18

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016093 True 1347 mRNA 0.43 5 7015962 7020428

Neighbor

gene id symbol gene type direction distance location
AMCG00016094 scaf4 coding downstream 26041 6960047 ~ 6989921 (-)
AMCG00016088 sod1 coding downstream 56996 6952612 ~ 6958966 (-)
AMCG00016085 NA coding downstream 118086 6875446 ~ 6897876 (-)
AMCG00016082 NA coding downstream 154580 6847806 ~ 6861382 (-)
AMCG00016090 NA coding downstream 182371 6831122 ~ 6833591 (-)
AMCG00016095 NA coding upstream 4674 7025102 ~ 7045994 (-)
AMCG00016096 NA coding upstream 33278 7053706 ~ 7056775 (-)
AMCG00016097 synj1 coding upstream 41389 7061817 ~ 7097527 (-)
AMCG00016106 NA coding upstream 453423 7473851 ~ 7508095 (-)
AMCG00016105 NA coding upstream 499738 7520166 ~ 7526254 (-)
G10956 NA non-coding downstream 792733 6222863 ~ 6223229 (-)
G10952 NA non-coding downstream 1126046 5889588 ~ 5889916 (-)
G10940 NA non-coding downstream 1174258 5841477 ~ 5841704 (-)
G10935 NA non-coding downstream 1264628 5750918 ~ 5751334 (-)
G10934 NA non-coding downstream 1269395 5746336 ~ 5746567 (-)
G11215 NA non-coding upstream 599270 7619698 ~ 7619997 (-)
G11216 NA non-coding upstream 600212 7620640 ~ 7620853 (-)
G11243 NA non-coding upstream 851989 7872417 ~ 7872769 (-)
G11247 NA non-coding upstream 946643 7967071 ~ 7967305 (-)
G11288 NA non-coding upstream 1073372 8093800 ~ 8095204 (-)
AMCG00016074 NA other downstream 2086062 4903856 ~ 4929900 (-)
AMCG00016049 NA other downstream 3095459 3886298 ~ 3920503 (-)
AMCG00016046 NA other downstream 3473426 3528842 ~ 3542536 (-)
G10478 NA other downstream 3980779 3034422 ~ 3035183 (-)
AMCG00016029 NA other downstream 4169605 2784125 ~ 2846357 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 660483 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 1098793 8119221 ~ 8124033 (-)
G11326 NA other upstream 1171118 8191546 ~ 8194432 (-)
AMCG00016134 NA other upstream 1803117 8823545 ~ 8827760 (-)
AMCG00016176 NA other upstream 3813984 10834412 ~ 10847811 (-)

Expression


Co-expression Network