AMCG00016096


Basic Information

Item Value
gene id AMCG00016096
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 7053706 ~ 7056775 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016096
GCTGAATGCATAGACAGCTGTATAAGTCCACTTCGGTATCTGAAATGTGAAACGCAGCCCCAGCCTGTACTGATTGTGttgagtgtgtggggggggcgcaGCCATGGTGCAGCTGCACGTCAAGCGCGGCGAGGAGAGCCAGTTTCTGTTCTGCACGACCACCGGCGCGGCGCTGGACGCCATCATTCAACAGGTGACGGACATCTATAATGGCAGGCTGAAGGTGGACAGGATTTGTTCAgAAATGGAAGAACTGGCCCAGCATGGCGTCACCCTTCCCCCGAACATGCAAGGATTGACAGACGAACAGATCGAGGAACTAAAGCTGAGAGACGAGTGGGGGGAGAAATGCATCCCGTGTGGAGGAGCCGAGTTCAAAAAAGATGAAATTGGAAGGAGGAATGGTCATGCTCccaatgaaaaaatgaagcaagttttgaaaaaaactaTCGAAGAAGCTAAATCATTAATTTCTAagGTCCAGGCCAACGTGTGTCTCACTTTGGACATGGTGACAGAAGCTCTTGACCAACTCCGGGGTGCTGTTACAATAGTATATCCGATGGGGCTTCCTCCACACGACCCAATCAGGATGGAGTTTGAAAATCAAGAAGACCTGTCTGGAACACAGGCGTCCTTGCAGGTGATTGCAGAAGAAGAGGCGCAGCTGTGGTGGGCAGCAAAGGAGTTACAAAGAGGGAAGAAACTACAGGAATATGTGGGGAGAAATGAGAAAACGAAAATAGTGGTAAAGATACAAAAGAAACTGGAAGAAGCCGATGATGATACCCACCTGAACTCTGATTGGTCTGACAGACAGGCACTGAAGAGGCAATTTCAGGGTCTCACTAATATCAAATGGGGACCTAGATGAACTCAATTGCAACCGATGGTGTCTTATCTCTGAAATTTGGAGTCATTGTGATAAGTTCTTTGCAACTCTGTTACCATACATAAGTCTTTTTTAACCTCCTCTCAAAGTGACCAATGCTAGCTGTGAAACCTCTTATTTAACATTTCTTGCACACTTAgaaataaagtttaaattatataagtTGAGTGCCTTCATTCACTCTTATTTCACTCATTGTTTTTTATCATTGAGGATATTGCTGCTACCTGTGAATCTGAGTGATAACGGTGCTAATGTGGTAGCATATGTGCATATGTTTGCATATAAATTCCATTAACCATCCACCATCAAATTCTAGAATTTATATCAAGCTTCCTTTCAATATCAGAAATCCTCAGTTTCCCATTGAATAGAGGCCCCAAG

Function

GO: NA

KEGG:

id description
K24229 CFAP298; cilia- and flagella-associated protein 298

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016096 True 1276 mRNA 0.45 6 7053706 7056775

Neighbor

gene id symbol gene type direction distance location
AMCG00016095 NA coding downstream 7712 7025102 ~ 7045994 (-)
AMCG00016093 NA coding downstream 33278 7015962 ~ 7020428 (-)
AMCG00016094 scaf4 coding downstream 63785 6960047 ~ 6989921 (-)
AMCG00016088 sod1 coding downstream 94740 6952612 ~ 6958966 (-)
AMCG00016085 NA coding downstream 155830 6875446 ~ 6897876 (-)
AMCG00016097 synj1 coding upstream 5042 7061817 ~ 7097527 (-)
AMCG00016106 NA coding upstream 417076 7473851 ~ 7508095 (-)
AMCG00016105 NA coding upstream 463391 7520166 ~ 7526254 (-)
AMCG00016108 LOC107730863,LOC107704782,LOC103363427,LOC101479746,LOC102203644 coding upstream 473136 7529911 ~ 7574480 (-)
AMCG00016107 frem2b,LOC106581006,LOC106612873,LOC108433801 coding upstream 551732 7608507 ~ 7616298 (-)
G10956 NA non-coding downstream 830477 6222863 ~ 6223229 (-)
G10952 NA non-coding downstream 1163790 5889588 ~ 5889916 (-)
G10940 NA non-coding downstream 1212002 5841477 ~ 5841704 (-)
G10935 NA non-coding downstream 1302372 5750918 ~ 5751334 (-)
G10934 NA non-coding downstream 1307139 5746336 ~ 5746567 (-)
G11215 NA non-coding upstream 562923 7619698 ~ 7619997 (-)
G11216 NA non-coding upstream 563865 7620640 ~ 7620853 (-)
G11243 NA non-coding upstream 815642 7872417 ~ 7872769 (-)
G11247 NA non-coding upstream 910296 7967071 ~ 7967305 (-)
G11288 NA non-coding upstream 1037025 8093800 ~ 8095204 (-)
AMCG00016074 NA other downstream 2123806 4903856 ~ 4929900 (-)
AMCG00016049 NA other downstream 3133203 3886298 ~ 3920503 (-)
AMCG00016046 NA other downstream 3511170 3528842 ~ 3542536 (-)
G10478 NA other downstream 4018523 3034422 ~ 3035183 (-)
AMCG00016029 NA other downstream 4207349 2784125 ~ 2846357 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 624136 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 1062446 8119221 ~ 8124033 (-)
G11326 NA other upstream 1134771 8191546 ~ 8194432 (-)
AMCG00016134 NA other upstream 1766770 8823545 ~ 8827760 (-)
AMCG00016176 NA other upstream 3777637 10834412 ~ 10847811 (-)

Expression


Co-expression Network