AMCG00016112


Basic Information

Item Value
gene id AMCG00016112
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 8048792 ~ 8051720 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016112
CGTCATTGTTACAGTCTGCAAATTATACTTCCAGAATATATCGATGACATCACAATAACGACTCGTATATATACGCCGACTTTACTTTCTTCCTCCTTCCGGTTTCTACATCCATGTATGTAGGAACTGATCCCGTCAGTGCCGACTTCAGTCACATCATGATGGACATCGTGAAGTTCGTGACTCCAGCGTATATCATGGCCCTCACTGAAAACCTGCCCCAGTGCTACACCATTGACTGTGTTGGTTCTAGGTGGTCTGAGGCGAAGcCCGATGCTGAACTCACAGCCAGCCATGAGCTTCGGGTCGAGATGAAGAAAATGCAGGATGAATTTCGGAAGAAGACTGAGGAGATGAATGCTGTGAAAGAAAGACTAGCGTCTGAGATGCGGAAGAGAGAGTGTGAAAACCAGGCACTGCTGAGTAAAATCAGTGCTCTTGAAGAGACGAATGACAAGTTCTTCAAAAAACTAGAAGAAGCCAAATCGAAGATCACAGCGCCTGTCCCAATGCCTCCGACCCCGCCCCCTCCTCCGCCTCCGCCACTGCCCCCGCCCCCGCCACCCGGAGCCCCTGGGATTCCCCTGCCCCCCGGAGCCCTTGGGATGCCCCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016112 True 614 mRNA 0.52 4 8048792 8051720

Neighbor

gene id symbol gene type direction distance location
AMCG00016117 alg5,LOC102793295 coding upstream 3847 8034903 ~ 8044945 (+)
AMCG00016116 NA coding upstream 18574 8013819 ~ 8030218 (+)
AMCG00016115 NA coding upstream 177283 7847361 ~ 7871509 (+)
AMCG00016109 trpc4b,LOC107752869,LOC107704724,LOC107588262,LOC107730855,LOC107683445 coding upstream 236613 7796925 ~ 7812179 (+)
AMCG00016100 NA coding upstream 630314 7403724 ~ 7418478 (+)
AMCG00016113 smad9,LOC107728873 coding downstream 30425 8082145 ~ 8092799 (+)
AMCG00016114 NA coding downstream 61301 8113021 ~ 8117376 (+)
AMCG00016121 NA coding downstream 123254 8174974 ~ 8178038 (+)
AMCG00016120 NA coding downstream 126987 8178707 ~ 8194672 (+)
AMCG00016123 NA coding downstream 147154 8198874 ~ 8202539 (+)
G11248 NA non-coding upstream 80894 7967594 ~ 7967898 (+)
G11246 NA non-coding upstream 81481 7966988 ~ 7967311 (+)
G11226 NA non-coding upstream 290067 7758475 ~ 7758725 (+)
G11210 NA non-coding upstream 427235 7620862 ~ 7621557 (+)
G11202 NA non-coding upstream 451467 7527047 ~ 7597325 (+)
G11287 NA non-coding downstream 42080 8093800 ~ 8095204 (+)
G11308 NA non-coding downstream 86995 8138715 ~ 8139223 (+)
G11363 NA non-coding downstream 381868 8433588 ~ 8475800 (+)
G11506 NA non-coding downstream 1044073 9095793 ~ 9096050 (+)
G11507 NA non-coding downstream 1044869 9096589 ~ 9096811 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other upstream 570206 7446450 ~ 7478586 (+)
AMCG00016103 NA other upstream 746750 7269855 ~ 7302042 (+)
AMCG00016091 NA other upstream 1023941 7022147 ~ 7024851 (+)
G10981 cct8,LOC107693911 other upstream 1383244 6664086 ~ 6665548 (+)
AMCG00016079 NA other upstream 1387124 6641658 ~ 6661668 (+)
AMCG00016136 NA other downstream 1016561 9068281 ~ 9089033 (+)
G11509 NA other downstream 1047700 9099420 ~ 9100036 (+)
G11545 NA other downstream 1171692 9223412 ~ 9226245 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other downstream 1507744 9559464 ~ 9591649 (+)
G11660 NA other downstream 1547095 9598815 ~ 9599156 (+)

Expression


Co-expression Network