AMCG00016114


Basic Information

Item Value
gene id AMCG00016114
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 8113021 ~ 8117376 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016114
TGTTTTGTGCCTAACAACCAATGAACAACAGCGAAGGAGGAGTCTAGTGTTCCCTATATACAGGTTTGTGGCATGCAGTGCAATAGCAAACACAATGCTGGGCTCCCTGCTTCTCCTGTGGGCTGGGCTTCTCCTCCTCTATTTCCTATGGAAGACACGGAGGCCCAAGAATTTTCCACCTGGTCCTCAACCATTTCCGATATTTGGGAATCTGCTGCAGCTAAACCTCAAGAATCCCATGAAAGACTTTGAAAAGCTGTCCAAGCGCTATGGAaaagtgtacagtgtgtatttCGGGGGCAAGCCGGTTGTGTTACTGCATGGTTTGCAGTCAGTGAAGGAAGCCCTGATGACTCGGGGAGTTGAATTTGGCGGGAGGCCCCAGGGCCTGCTGGTCAATGACATTAATGAGAATAAAGGTGTAATTATAGTCAACTACGGCCCCAGCTGGAAGGAGCAGCGGCGGTTTGCTATGAGCACCCTGAGGAACTTCGGGCTGGGAAAGCTGTCTATGGAGGAGAGGATTCTGGAGGAGACTTCACATCTCAACTCATACATAGATAAGAGTGCAGGTCAGTGCTTGGACCCTCAAACATTGTTCCATAATGCCTTATCCAATGTCATCTGTGCCATCATGTTTGGATCCCACTACAACTATGAGGACCAGTCCTTCCAGTCCCTGATACGAATgataactgaaaacacaaaaattatTAATGGACCTTGGGGCATGCTCTATGATACCATACCCTTAATTAGGAGCTTACCTCTGCCTTTCCAGAAAATCTTTGAAAACCGAGACAAGGTGAAAGCATTTTTCCAAGCCAAAGTGACTGAGCACAAGGAGACACGGGTCCCAGGAAAGCCACGAGACATGATTGACTGCTATCTCAATGAAATTGACAAGAGAGGTAATGATGGCTCCTCCTTTGATGATGGCTTCATGATGGTCTTCTTGATGGATCTCTTTGTTGCTGGAACAGACACCAGCTCTACTACTCTCCGCGTGGGCCTCTTGCAGCTCATGATGCATCCAGATGTGCAAGCGCGGTGCCAACAGGAGATCGACACTGTCCTTGGAGAGAGAAAGCAGGTCTGCTATGAGGATAGGCACAGGATGCCCTATGTCCAAGCTGTGATCCACGAAGTGCAGCGCTATGGAAGCGTCGTCCCTCTCAGTGTCTTCCACGCCACCACTCAGGATACACAGGTGCTGGGCTACAGCATTCCAAAGGCGCTGGCACGCATGGAGCTGTTCTTGTTCTTTGTGACGCTGCTGCGCCGCTTCCAGTTCCACTGGCCCCAGGATGGTGGGGAGCCCGACCTCACGCCTCACTTTGGAATCATCCAGGGACCCAGACCCTACCGACTGGGAGTGAGGCTCAGGGGGCGGCAGTCT

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016114 True 1399 mRNA 0.51 8 8113021 8117376

Neighbor

gene id symbol gene type direction distance location
AMCG00016113 smad9,LOC107728873 coding upstream 20222 8082145 ~ 8092799 (+)
AMCG00016112 NA coding upstream 61301 8048792 ~ 8051720 (+)
AMCG00016117 alg5,LOC102793295 coding upstream 68076 8034903 ~ 8044945 (+)
AMCG00016116 NA coding upstream 82803 8013819 ~ 8030218 (+)
AMCG00016115 NA coding upstream 241512 7847361 ~ 7871509 (+)
AMCG00016121 NA coding downstream 57598 8174974 ~ 8178038 (+)
AMCG00016120 NA coding downstream 61331 8178707 ~ 8194672 (+)
AMCG00016123 NA coding downstream 81498 8198874 ~ 8202539 (+)
AMCG00016122 NA coding downstream 89463 8206839 ~ 8225134 (+)
AMCG00016126 dclk1,LOC105909296 coding downstream 109755 8227131 ~ 8234032 (+)
G11287 NA non-coding upstream 17817 8093800 ~ 8095204 (+)
G11248 NA non-coding upstream 145123 7967594 ~ 7967898 (+)
G11246 NA non-coding upstream 145710 7966988 ~ 7967311 (+)
G11226 NA non-coding upstream 354296 7758475 ~ 7758725 (+)
G11210 NA non-coding upstream 491464 7620862 ~ 7621557 (+)
G11308 NA non-coding downstream 21339 8138715 ~ 8139223 (+)
G11363 NA non-coding downstream 316212 8433588 ~ 8475800 (+)
G11506 NA non-coding downstream 978417 9095793 ~ 9096050 (+)
G11507 NA non-coding downstream 979213 9096589 ~ 9096811 (+)
G11508 NA non-coding downstream 979893 9097269 ~ 9097927 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other upstream 634435 7446450 ~ 7478586 (+)
AMCG00016103 NA other upstream 810979 7269855 ~ 7302042 (+)
AMCG00016091 NA other upstream 1088170 7022147 ~ 7024851 (+)
G10981 cct8,LOC107693911 other upstream 1447473 6664086 ~ 6665548 (+)
AMCG00016079 NA other upstream 1451353 6641658 ~ 6661668 (+)
AMCG00016136 NA other downstream 950905 9068281 ~ 9089033 (+)
G11509 NA other downstream 982044 9099420 ~ 9100036 (+)
G11545 NA other downstream 1106036 9223412 ~ 9226245 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other downstream 1442088 9559464 ~ 9591649 (+)
G11660 NA other downstream 1481439 9598815 ~ 9599156 (+)

Expression


Co-expression Network