AMCG00016123


Basic Information

Item Value
gene id AMCG00016123
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 8198874 ~ 8202539 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016123
AATGAGTGGAAAACCAGGTACGAGACCCAGCAGGAGCTAAACAGGCAGCTGGAAAGGCAAATTGCCCTGCTCCAAGGCAAGCTTGAGGACATACGTGCTAATCCCATTGACAGACTGTCTTCCATTCGGTCCTATGATGAGATGCCAGTGGGTGCTCTGAAACAGCTACTTAAGCAATTAGAGAACGACAAAAAGAGTCTGCAGAACCAGCTTAAGGATTACACACTGAGAATAGAGCAGGAGGCAAAGGCCTACCACAAGGCCAACGATGAGCGGCGCACGTACCTTGCAGAAATATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016123 True 300 mRNA 0.49 4 8198874 8202539

Neighbor

gene id symbol gene type direction distance location
AMCG00016120 NA coding upstream 4202 8178707 ~ 8194672 (+)
AMCG00016121 NA coding upstream 20836 8174974 ~ 8178038 (+)
AMCG00016114 NA coding upstream 81498 8113021 ~ 8117376 (+)
AMCG00016113 smad9,LOC107728873 coding upstream 106075 8082145 ~ 8092799 (+)
AMCG00016112 NA coding upstream 147154 8048792 ~ 8051720 (+)
AMCG00016122 NA coding downstream 4300 8206839 ~ 8225134 (+)
AMCG00016126 dclk1,LOC105909296 coding downstream 24592 8227131 ~ 8234032 (+)
AMCG00016124 LOC108433804,LOC107683036,LOC107752421 coding downstream 111604 8314143 ~ 8326539 (+)
AMCG00016128 mab21l1,LOC107730834 coding downstream 320922 8523461 ~ 8524540 (+)
AMCG00016132 LOC102798547 coding downstream 586430 8788969 ~ 8809035 (+)
G11308 NA non-coding upstream 59651 8138715 ~ 8139223 (+)
G11287 NA non-coding upstream 103670 8093800 ~ 8095204 (+)
G11248 NA non-coding upstream 230976 7967594 ~ 7967898 (+)
G11246 NA non-coding upstream 231563 7966988 ~ 7967311 (+)
G11226 NA non-coding upstream 440149 7758475 ~ 7758725 (+)
G11363 NA non-coding downstream 231049 8433588 ~ 8475800 (+)
G11506 NA non-coding downstream 893254 9095793 ~ 9096050 (+)
G11507 NA non-coding downstream 894050 9096589 ~ 9096811 (+)
G11508 NA non-coding downstream 894730 9097269 ~ 9097927 (+)
G11510 NA non-coding downstream 898372 9100911 ~ 9101316 (+)
AMCG00016101 trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 other upstream 720288 7446450 ~ 7478586 (+)
AMCG00016103 NA other upstream 896832 7269855 ~ 7302042 (+)
AMCG00016091 NA other upstream 1174023 7022147 ~ 7024851 (+)
G10981 cct8,LOC107693911 other upstream 1533326 6664086 ~ 6665548 (+)
AMCG00016079 NA other upstream 1537206 6641658 ~ 6661668 (+)
AMCG00016136 NA other downstream 865742 9068281 ~ 9089033 (+)
G11509 NA other downstream 896881 9099420 ~ 9100036 (+)
G11545 NA other downstream 1020873 9223412 ~ 9226245 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other downstream 1356925 9559464 ~ 9591649 (+)
G11660 NA other downstream 1396276 9598815 ~ 9599156 (+)

Expression


Co-expression Network