Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016143 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 9237700 ~ 9286875 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016143 | True | 459 | mRNA | 0.51 | 5 | 9237700 | 9286875 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016140 | NA | coding | upstream | 118262 | 9117902 ~ 9119438 (+) |
| AMCG00016135 | LOC104923292 | coding | upstream | 258795 | 8964206 ~ 8978905 (+) |
| AMCG00016132 | LOC102798547 | coding | upstream | 428665 | 8788969 ~ 8809035 (+) |
| AMCG00016128 | mab21l1,LOC107730834 | coding | upstream | 713160 | 8523461 ~ 8524540 (+) |
| AMCG00016124 | LOC108433804,LOC107683036,LOC107752421 | coding | upstream | 911161 | 8314143 ~ 8326539 (+) |
| AMCG00016145 | NA | coding | downstream | 109727 | 9396602 ~ 9406042 (+) |
| AMCG00016156 | hmgb1,LOC105901051,LOC103353583 | coding | downstream | 207587 | 9494462 ~ 9498792 (+) |
| AMCG00016157 | katnal1,LOC107578067,LOC107697436,LOC107741157 | coding | downstream | 223149 | 9510024 ~ 9521955 (+) |
| AMCG00016158 | NA | coding | downstream | 245227 | 9532102 ~ 9550216 (+) |
| AMCG00016160 | NA | coding | downstream | 370715 | 9657590 ~ 9658570 (+) |
| G11511 | NA | non-coding | upstream | 133518 | 9103625 ~ 9104182 (+) |
| G11510 | NA | non-coding | upstream | 136384 | 9100911 ~ 9101316 (+) |
| G11508 | NA | non-coding | upstream | 139773 | 9097269 ~ 9097927 (+) |
| G11507 | NA | non-coding | upstream | 140889 | 9096589 ~ 9096811 (+) |
| G11506 | NA | non-coding | upstream | 141650 | 9095793 ~ 9096050 (+) |
| G11570 | NA | non-coding | downstream | 27123 | 9313998 ~ 9314434 (+) |
| G11572 | NA | non-coding | downstream | 44016 | 9330891 ~ 9333859 (+) |
| G11672 | NA | non-coding | downstream | 677089 | 9963964 ~ 9964237 (+) |
| G11674 | NA | non-coding | downstream | 681667 | 9968542 ~ 9968783 (+) |
| G11678 | NA | non-coding | downstream | 722164 | 10009039 ~ 10009385 (+) |
| G11545 | NA | other | upstream | 11455 | 9223412 ~ 9226245 (+) |
| G11509 | NA | other | upstream | 137664 | 9099420 ~ 9100036 (+) |
| AMCG00016136 | NA | other | upstream | 148667 | 9068281 ~ 9089033 (+) |
| AMCG00016101 | trim3b,LOC108423836,LOC103363426,LOC107701140,LOC107720632 | other | upstream | 1759114 | 7446450 ~ 7478586 (+) |
| AMCG00016103 | NA | other | upstream | 1935658 | 7269855 ~ 7302042 (+) |
| AMCG00016159 | ubl3,LOC107578048,LOC106604009 | other | downstream | 272589 | 9559464 ~ 9591649 (+) |
| G11660 | NA | other | downstream | 311940 | 9598815 ~ 9599156 (+) |
| AMCG00016174 | NA | other | downstream | 1557252 | 10844127 ~ 10958032 (+) |
| G11921 | NA | other | downstream | 2581950 | 11868825 ~ 11871735 (+) |
| AMCG00016202 | NA | other | downstream | 2706097 | 11992972 ~ 12005952 (+) |
