AMCG00016152


Basic Information

Item Value
gene id AMCG00016152
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9406302 ~ 9410567 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016152
GACTCAAATGATGACCTGCCTCTCGTTCAGAAGCCTCAACCTTACTGGCAGGATGACCTGAGGTGTGGCCACAAAGAAGATGTTCTGTGTATCGCTCAGTGCCCTCCATCCCTATTGGCTACCTCAAGCTACGACGGAGAGATCATTGTGTGGAATCTGGTCTCTGGACACCTACACTGTCGCCTGCTCAGCCCCTACCCTCCAGATTGCACAGAAGGTCGTGTTCAAATTCATAAAAATGAAAGCGGAGGCATCGATCGAAGTGTATCAAGCATCGTGTTCATGAAGACACGGGCTCGGAATGTGGAATTCACTGCTTGCCTGCTTTCCAGCGGACCCCAAGGCTATGTCAGTTTCTGGAGTCTGATCAATGGAGGTAAAATATTTGCCACTTTTGAAGCAGGATACAATGAGCGCAAAAGGCCCTTACAGGATGAATGCTTTCAATGCACATTTGTGTTTCAGTCCAGAATGAAAAGCCACATCACTAAAATGGCTGTGACTGTGGATGACAATCTGCTTTATGTTGCCGATCAGTCTGGCTTCATCTATGTTTATGATGTCAAGAACTATGCTATTGTGCCTGAGCAGGAGGCCCCTAAAAATATAAACTACTGGCGGGCACACATCAGCAGTGTCACAAGTTTGGTGATTATAGATGAAGATAAAGTGTTGCTCACCTCCTCGACAGACTGTACAGTGCGACTGTGGAGCATACATGGAGAGTTCATAGgTACATTTGGGCAGCCTGAGGCTTGGAGCATCCATACAATGACTTCTTGGAAGCATCCAATGGTTCCCTATGAAATTTTAGTGGATCCCTTGAGCATGCCAGCTCACCATATCTTGGAAGGAGAGAACAGTGTCCTGGATATTATCAACGCAGGTCAAACTGAGAACAAAGATGCAACTGAAACAAAGTCTGAATTGCACTACAAGCACAAATACCCTCCACTCTGCATCAGTGACAAAGACATCGAAGAAGAAATTAACCAAATGAGTTATCCAGAAGAGCACGGGAAAAGGCTCCGGCATGAAATATTCAAGCACACCAACAAACCACCCAACCATGGAGGTCCAAAGGCATACCACACTTTGAAGTACTTTGAAATAGTCAATGCCCCCACTACCTGCGAGAGGCCTGATCTGTCTGCTGCTGGAATTGACCCCTTCCTGTCTGAATATATGGAAGAGCAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016152 True 1200 mRNA 0.46 10 9406302 9410567

Neighbor

gene id symbol gene type direction distance location
AMCG00016151 NA coding downstream 47572 9333693 ~ 9358730 (-)
AMCG00016148 rxfp2,LOC106591039 coding downstream 116978 9267201 ~ 9289324 (-)
AMCG00016144 NA coding downstream 222392 9119568 ~ 9183910 (-)
AMCG00016142 NA coding downstream 290148 9111277 ~ 9116154 (-)
AMCG00016141 NA coding downstream 295495 9089169 ~ 9110807 (-)
AMCG00016155 NA coding upstream 5955 9416522 ~ 9416725 (-)
AMCG00016154 NA coding upstream 9562 9420129 ~ 9427244 (-)
AMCG00016149 NA coding upstream 22063 9432630 ~ 9441739 (-)
AMCG00016153 NA coding upstream 42253 9452820 ~ 9456545 (-)
AMCG00016146 NA coding upstream 50926 9461493 ~ 9464391 (-)
G11571 NA non-coding downstream 91855 9314000 ~ 9314447 (-)
G11482 NA non-coding downstream 347202 9055904 ~ 9059100 (-)
G11346 NA non-coding downstream 1074499 8326182 ~ 8331803 (-)
G11345 NA non-coding downstream 1085260 8320697 ~ 8321042 (-)
G11314 NA non-coding downstream 1232328 8173689 ~ 8173974 (-)
G11633 hmgb1,LOC105901051,LOC103353583 non-coding upstream 25235 9435802 ~ 9498753 (-)
G11650 NA non-coding upstream 132941 9543508 ~ 9543743 (-)
G11658 NA non-coding upstream 179168 9589735 ~ 9594953 (-)
G11662 NA non-coding upstream 285206 9695773 ~ 9696054 (-)
G11675 NA non-coding upstream 558010 9968577 ~ 9968783 (-)
AMCG00016134 NA other downstream 578542 8823545 ~ 8827760 (-)
G11326 NA other downstream 1211870 8191546 ~ 8194432 (-)
AMCG00016119 NA other downstream 1282269 8119221 ~ 8124033 (-)
AMCG00016110 ufm1,LOC107701138 other downstream 1652865 7680911 ~ 7753437 (-)
AMCG00016074 NA other downstream 4476402 4903856 ~ 4929900 (-)
AMCG00016176 NA other upstream 1423845 10834412 ~ 10847811 (-)
AMCG00016194 NA other upstream 2355585 11766152 ~ 11781547 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other upstream 2421861 11832428 ~ 11947322 (-)
AMCG00016211 NA other upstream 2912594 12323161 ~ 12329033 (-)
AMCG00016226 NA other upstream 3439311 12849878 ~ 12870560 (-)

Expression


Co-expression Network