AMCG00016154


Basic Information

Item Value
gene id AMCG00016154
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9420129 ~ 9427244 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016154
AATCCTCACAGACCAAGACCGCAGCACAGTCCTGTTAGGTGGGGGGGTGATGGCCACCATGTTCAATGGGAAGTATGCAGAGGGCAGAAATGGTGAGATTTCCTTCCATGGCACCTCCAGAGACACCTTCACGTCTCTCCTGGAATACCTTTACACCGATTCATGCTGTCCAGCTACTGCCCTGCAGGCCATGTCTGTATTGGTCTTTGCGGACATGTACCAGTTGACTCGTTGGCAGCACACTAACCATCTGATCTTCAGTCAGAAAGAGGACCCATACGGAACTTCACCGAGTAGGAGAGACTTCATGGAGCTGGCTTCAGATCAGTGCCCCAGATACCACTGCACATTTGACTGGGACCCTGATCCGAGCGCATTGGCCTCTGCAGTGCATGATGGGCTGGCACACAGGACAGTCCTCTCAGTGCACTCTGAGATGATGGCCACCATGTTCAATGGGAAGTATGCAGAGGCCAGAAGTTGTGAGGTTTCCTTCCATGGGACCTCCAGGGACACCTTCCAGTCTTTCCTGAAATACCTTTACACCGATTCATGCTGTCCAGCTAGTGCCCTGCAGGCCATGTCTGTATTGGTCTTTGCGGAGATGTACCAGTTGACTTGCTTGCAGCACACGTGGGAGGCGTGTAGCATGCCCAGCAGGGAGCTGCTCAACTCCAGCCTAAGAGTGGTCATCCTTCTCAGGAGGGCCACATTTCACAACACATTTCAGTCAGTCTGGTTGCTTCATTTCATCGCCAGTAACCATCAGATCTTCAGTCAGAAAGATTACTTCCTGAACCTCACGGAGGAGAGATTTCGTAGAGCGACACAGGAAGACGTGGTGTGCCCTGCAGGCCATGTTTGGATTGGTCTTTGCGGACATGTACCAGTTGACTCGTTGGCAGCACACGTGGGAGGCGTGTGTACATACCTGCAGAGCATGCCCAGCAGGGAGGTTTTCACCTCCAGCCTAAGAGTGGTCATCCTTCTAAGGAGGGCCATGCTTCACAACACATGCGCTATCCACCTGGCtcctgcatttcatttcatcAACAATAACCATCTGATCTCCAGCCAGAAAGATCACTTCCTGGACCTCACTGAGGAGGAGAGACTTCATGGAGCTAGCTTCATATCAGTGCCCCAGATATTTATGGGATCTTTTGGGAAATGGCCTCCTCACACTCCTTTGTCTAGTAAACAGCTTGGCCTCATGCAAGGGCCGGCACACAGGACAGTCCTCTCGGTGCACTCTGAGGTGATGGCCACCATATTCAATGGGAAGTATGCAGAGGCCAGGAATTGTGAGGTTTCCTTCCATGGGACCTCCAGAGACACCTTCCCATCGTTCCTGGATACCTTTACACCGATTCATGCTGTCCAGCTAGTGCCCTGCAGGCCATCTAGTGCCCTGCAGGCCATGTCTGTATTGGGCTTCGTGGAGATAGCGTTTGTACACATACCTGAAGCAAGCTCGGCAAAGCACCATCAGCTATCCACATGGCTCCTTCATTTCAATGCCAATAACGATGCTATCTTCAGCCAGAAAGACTTGTGGAAACTCACTGACGAGGAGAGACTTCATGGAGCTGCATGGGTGGCCATTGTTGTGGTACATAAGGGAGCTGGTTCAGTTCCAGTGCCATGTTCACTGCTCTGGACTACGCTGTACACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016154 True 1675 mRNA 0.52 8 9420129 9427244

Neighbor

gene id symbol gene type direction distance location
AMCG00016155 NA coding downstream 3404 9416522 ~ 9416725 (-)
AMCG00016152 NA coding downstream 9562 9406302 ~ 9410567 (-)
AMCG00016151 NA coding downstream 61399 9333693 ~ 9358730 (-)
AMCG00016148 rxfp2,LOC106591039 coding downstream 130805 9267201 ~ 9289324 (-)
AMCG00016144 NA coding downstream 236219 9119568 ~ 9183910 (-)
AMCG00016149 NA coding upstream 5386 9432630 ~ 9441739 (-)
AMCG00016153 NA coding upstream 25576 9452820 ~ 9456545 (-)
AMCG00016146 NA coding upstream 34249 9461493 ~ 9464391 (-)
AMCG00016150 NA coding upstream 41102 9468346 ~ 9475518 (-)
AMCG00016147 NA coding upstream 51546 9478790 ~ 9489618 (-)
G11571 NA non-coding downstream 105682 9314000 ~ 9314447 (-)
G11482 NA non-coding downstream 361029 9055904 ~ 9059100 (-)
G11346 NA non-coding downstream 1088326 8326182 ~ 8331803 (-)
G11345 NA non-coding downstream 1099087 8320697 ~ 8321042 (-)
G11314 NA non-coding downstream 1246155 8173689 ~ 8173974 (-)
G11633 hmgb1,LOC105901051,LOC103353583 non-coding upstream 8558 9435802 ~ 9498753 (-)
G11650 NA non-coding upstream 116264 9543508 ~ 9543743 (-)
G11658 NA non-coding upstream 162491 9589735 ~ 9594953 (-)
G11662 NA non-coding upstream 268529 9695773 ~ 9696054 (-)
G11675 NA non-coding upstream 541333 9968577 ~ 9968783 (-)
AMCG00016134 NA other downstream 592369 8823545 ~ 8827760 (-)
G11326 NA other downstream 1225697 8191546 ~ 8194432 (-)
AMCG00016119 NA other downstream 1296096 8119221 ~ 8124033 (-)
AMCG00016110 ufm1,LOC107701138 other downstream 1666692 7680911 ~ 7753437 (-)
AMCG00016074 NA other downstream 4490229 4903856 ~ 4929900 (-)
AMCG00016176 NA other upstream 1407168 10834412 ~ 10847811 (-)
AMCG00016194 NA other upstream 2338908 11766152 ~ 11781547 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other upstream 2405184 11832428 ~ 11947322 (-)
AMCG00016211 NA other upstream 2895917 12323161 ~ 12329033 (-)
AMCG00016226 NA other upstream 3422634 12849878 ~ 12870560 (-)

Expression


Co-expression Network