AMCG00016163


Basic Information

Item Value
gene id AMCG00016163
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9724589 ~ 9741418 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016163
ACCACAGACATTCTCCACGGCCCCAGTATTAGAGTAACAGTGTTAAATATACTTTTAGGCAGAGGTAAAAGAGTCCAATATGGCTCCTGCACTGTCCAGCTATTTTTCCTGAATTTAGGAAGCACTATGGAGCCCTTTGTCATTGCTATGATGGCCTACAACCACTTAGTGGCAATTGCCAATCCTCTGAGATACCACAGCATCCTCACAAAAACCCATttcaCTACAAAAAGAAGACCAAGACTGCAGAACACAATGGCAGTTTTTAACTACAACATTTCTGAGTTTCACATTGTCGGCTTCCCTGAACTCAAGCAACTGGATGTTCTCTTGTCGGTAATTTTCCTTGTCTCTTACATTTTAACTCTGCTTGGGAATTTCACTGTCCTTTACATCATCAAAACTCATCGGAAGGCTCACACACCCATGTTCTTCATCATACTCACCCTGTCTGTGTCCAATGTCATTTTCAGCACAGCGCTGACGCCAAAAATCATAGCACGGTACATGATGAACGACCAAGCGATTACGTTCCACATGTGCTTcgttcaaatgtattttgcacatGCTTTGGGAACTGTGGATGCCTTCGTCTTAATGTTCATGGCAATTGATCGCTACCTTGCAGTCTCTCACCCGCTAAGGTACCCCTCCATTATGACAAACACACGGGCCATTCAGTGCTGCTGCTTAATGTTTTTTCTGGGAATGTTGGGCCCTGTTACAGCACTCACCTATGCCTCCCGGGTACACTTCTGTGGCCCCAATGAAATCCTGCACTTTTTCTGTGAACACAGTTGGGTTGTGAGGCTGGCCTGTGCTGACACAACAATGAACACCCGAGCAGCAATAACAGTGGCAGCTGTGGTgttatgtgtgtattttgctcACATGGGGGGACTTTATTTAAATCACGACATGCGAATTACACTGGGTATTTTGTATAGCCTTCTGCCACCCATGTTAAATCCAATTATTTACAGCCTAAAGACTAAAGAAATAAAGGAGGTCATTGTAAAGGTGTTGCAAAGGGGAGGAGTAGGTGCCAAAATTGAATTACACCAGCAAGTATGCCTGGTCAAGCCAAGCTCCATAGAAGAAGTCCTGGGCCGGGCAGTGATGGTCGAAGATGTCCTGGGCGAGGGGGAACAGAGTCGGCTCCCAGAGAGAACAGAGTCGGGTTTTCAGTACAGATCGAAGGGAGCCATCAAACAAGGAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016163 True 1221 mRNA 0.46 4 9724589 9741418

Neighbor

gene id symbol gene type direction distance location
AMCG00016160 NA coding upstream 66019 9657590 ~ 9658570 (+)
AMCG00016158 NA coding upstream 174373 9532102 ~ 9550216 (+)
AMCG00016157 katnal1,LOC107578067,LOC107697436,LOC107741157 coding upstream 202634 9510024 ~ 9521955 (+)
AMCG00016156 hmgb1,LOC105901051,LOC103353583 coding upstream 225797 9494462 ~ 9498792 (+)
AMCG00016145 NA coding upstream 318547 9396602 ~ 9406042 (+)
AMCG00016168 NA coding downstream 49896 9791314 ~ 9797697 (+)
AMCG00016170 NA coding downstream 71397 9812815 ~ 9813758 (+)
AMCG00016175 NA coding downstream 1092911 10834329 ~ 10842459 (+)
AMCG00016181 NA coding downstream 1509729 11251147 ~ 11252118 (+)
AMCG00016182 NA coding downstream 1627944 11369362 ~ 11370140 (+)
G11572 NA non-coding upstream 390730 9330891 ~ 9333859 (+)
G11570 NA non-coding upstream 410155 9313998 ~ 9314434 (+)
G11511 NA non-coding upstream 620407 9103625 ~ 9104182 (+)
G11510 NA non-coding upstream 623273 9100911 ~ 9101316 (+)
G11508 NA non-coding upstream 626662 9097269 ~ 9097927 (+)
G11672 NA non-coding downstream 222546 9963964 ~ 9964237 (+)
G11674 NA non-coding downstream 227124 9968542 ~ 9968783 (+)
G11678 NA non-coding downstream 267621 10009039 ~ 10009385 (+)
G11681 NA non-coding downstream 356280 10097698 ~ 10098122 (+)
G11684 NA non-coding downstream 394510 10135928 ~ 10136190 (+)
G11660 NA other upstream 125433 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 132940 9559464 ~ 9591649 (+)
G11545 NA other upstream 498344 9223412 ~ 9226245 (+)
G11509 NA other upstream 624553 9099420 ~ 9100036 (+)
AMCG00016136 NA other upstream 635556 9068281 ~ 9089033 (+)
AMCG00016174 NA other downstream 1102709 10844127 ~ 10958032 (+)
G11921 NA other downstream 2127407 11868825 ~ 11871735 (+)
AMCG00016202 NA other downstream 2251554 11992972 ~ 12005952 (+)
AMCG00016213 NA other downstream 2693718 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 3036806 12778224 ~ 12786899 (+)

Expression


Co-expression Network