AMCG00016168


Basic Information

Item Value
gene id AMCG00016168
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9791314 ~ 9797697 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016168
ATGACATTTACAAACCTTACAGCTGAAGCCATAACAGAATTTGACATCATTGCTTTCAATGAGACTCAAAATCCAAAGGCAGTCGGATGCATCATTTTGAccatttatttactgattttattGGGCAGCAGTGCAAACATCTACATCATCGCAAGGGACAAGCGTCTGCACACCCCAATACATCATCCACAGCTCCAGTACCAGCCCAACAATGATCCTGCTTGTGTCAATCCTGATGAATATTTTGTTGTATCAACTGTTCTTGccttcttcattttatttggttcctttgctttgatttgtataTCCTACCTTATGATAATCTTCACCCTGCTTAAAATTGCCCCCTCAGaagacagacaaaaaacatataGCACTTGTTCAAACCACTTAATTGTAgttgtttctatttttgttcCTCCATTTGTCAGTATTATTCTAACCCGTATAGGTTTGGTGTTGACCCTCACAGAACGTAATGCACTATTCATTTTCTCTTGTCTGGGCCCCTGCTTGGTGAATCCTTTTGTGTACTGCTTCAGAACAAAGGAAATAAGACCTTGTGTCAATCCTGATGAATATTTTGCTGTATCATCTGTTCTTgtcttcttcattttatttggttCCTTTGCTTTGATTATTATATCCTACCTTAAGATAATTTTCACCGTGCTTAAAATTGCCCCCTCAgaagacaggaaaaaaatgtacagcactTGTTCAAACCACTTAATAGTAGTTGTTTCAGTTTTTGCTCTTCCATTTGTCATTGTTATTGTAACCCGCATAGGTTTGGTGTTGAGTGTCACAGAAcgtaatgtattaattattttctcttctctggGCCCCTGCTTGGTGAATCCCTTTCTGTACTGCTTCAGAACAAAGGAAATAAGACGTCAGCTTTTCAGAATATTCAAGGCTGTTGCTCCCCAAGAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016168 True 942 mRNA 0.38 4 9791314 9797697

Neighbor

gene id symbol gene type direction distance location
AMCG00016163 NA coding upstream 49896 9724589 ~ 9741418 (+)
AMCG00016160 NA coding upstream 132744 9657590 ~ 9658570 (+)
AMCG00016158 NA coding upstream 241098 9532102 ~ 9550216 (+)
AMCG00016157 katnal1,LOC107578067,LOC107697436,LOC107741157 coding upstream 269359 9510024 ~ 9521955 (+)
AMCG00016156 hmgb1,LOC105901051,LOC103353583 coding upstream 292522 9494462 ~ 9498792 (+)
AMCG00016170 NA coding downstream 15118 9812815 ~ 9813758 (+)
AMCG00016175 NA coding downstream 1036632 10834329 ~ 10842459 (+)
AMCG00016181 NA coding downstream 1453450 11251147 ~ 11252118 (+)
AMCG00016182 NA coding downstream 1571665 11369362 ~ 11370140 (+)
AMCG00016180 NA coding downstream 1592112 11389809 ~ 11390312 (+)
G11572 NA non-coding upstream 457455 9330891 ~ 9333859 (+)
G11570 NA non-coding upstream 476880 9313998 ~ 9314434 (+)
G11511 NA non-coding upstream 687132 9103625 ~ 9104182 (+)
G11510 NA non-coding upstream 689998 9100911 ~ 9101316 (+)
G11508 NA non-coding upstream 693387 9097269 ~ 9097927 (+)
G11672 NA non-coding downstream 166267 9963964 ~ 9964237 (+)
G11674 NA non-coding downstream 170845 9968542 ~ 9968783 (+)
G11678 NA non-coding downstream 211342 10009039 ~ 10009385 (+)
G11681 NA non-coding downstream 300001 10097698 ~ 10098122 (+)
G11684 NA non-coding downstream 338231 10135928 ~ 10136190 (+)
G11660 NA other upstream 192158 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 199665 9559464 ~ 9591649 (+)
G11545 NA other upstream 565069 9223412 ~ 9226245 (+)
G11509 NA other upstream 691278 9099420 ~ 9100036 (+)
AMCG00016136 NA other upstream 702281 9068281 ~ 9089033 (+)
AMCG00016174 NA other downstream 1046430 10844127 ~ 10958032 (+)
G11921 NA other downstream 2071128 11868825 ~ 11871735 (+)
AMCG00016202 NA other downstream 2195275 11992972 ~ 12005952 (+)
AMCG00016213 NA other downstream 2637439 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 2980527 12778224 ~ 12786899 (+)

Expression


Co-expression Network