AMCG00016169


Basic Information

Item Value
gene id AMCG00016169
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9833338 ~ 9834282 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016169
ATGCCATTTACAAACCTTACAGCTGAAGCCATAACAGAATTTTACATCAATGGTTTCAAAGGGACTCAGAATCCAAAGGCAGTCGGATGCATcattttgataatttttttactgattttattgGGCAGCAGCGCAAACATCTACATCATCGCAAGGGACAAGCGTCTGCACACCCCAATGGTAGCTTGTGTTAATCCTGATGAATATTTTGTTGCATCAACTGTGATCtccttctttattttgtttggtccatttggttttatttttatatcctaCCTTATGATAATCTTCACTGTTCTTAAAATTGCCCCctcagaagaaaggaaaaaaacatacagcactTGTTTAAATCACTTAATAGTagttgcttctgtttttgttcctcCATTTGTCAGTATTATTCTAACTCGTATAGGTTTTGTGTTGAGCCTCACAGAaggtaatgtattaattattttctcttctcttggCCCCTGCTTGGTGAATCCTTTCGTGTACTGCTTCAGAACAAAGGAAATAAGAAGAAAACTTTTCAGAATAATCAAGGCTGTGGCTCCCCAAGAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016169 True 567 mRNA 0.37 2 9833338 9834282

Neighbor

gene id symbol gene type direction distance location
AMCG00016165 NA coding downstream 65416 9767215 ~ 9767922 (-)
AMCG00016164 NA coding downstream 120220 9712133 ~ 9713118 (-)
AMCG00016166 NA coding downstream 121340 9707271 ~ 9711998 (-)
AMCG00016161 NA coding downstream 148184 9684166 ~ 9685154 (-)
AMCG00016162 NA coding downstream 149340 9675938 ~ 9683998 (-)
AMCG00016167 NA coding upstream 28989 9863271 ~ 9872425 (-)
AMCG00016172 NA coding upstream 69761 9904043 ~ 9904942 (-)
AMCG00016171 NA coding upstream 70681 9904963 ~ 9919774 (-)
AMCG00016173 NA coding upstream 241173 10075455 ~ 10118219 (-)
AMCG00016178 NA coding upstream 1167458 11001740 ~ 11034263 (-)
G11662 NA non-coding downstream 137284 9695773 ~ 9696054 (-)
G11658 NA non-coding downstream 238385 9589735 ~ 9594953 (-)
G11650 NA non-coding downstream 289595 9543508 ~ 9543743 (-)
G11633 hmgb1,LOC105901051,LOC103353583 non-coding downstream 334585 9435802 ~ 9498753 (-)
G11571 NA non-coding downstream 518891 9314000 ~ 9314447 (-)
G11675 NA non-coding upstream 134295 9968577 ~ 9968783 (-)
G11677 NA non-coding upstream 156325 9990607 ~ 9991140 (-)
G11680 NA non-coding upstream 179918 10014200 ~ 10014451 (-)
G11688 NA non-coding upstream 403213 10237495 ~ 10237800 (-)
G11699 NA non-coding upstream 494437 10328719 ~ 10329089 (-)
AMCG00016134 NA other downstream 1005578 8823545 ~ 8827760 (-)
G11326 NA other downstream 1638906 8191546 ~ 8194432 (-)
AMCG00016119 NA other downstream 1709305 8119221 ~ 8124033 (-)
AMCG00016110 ufm1,LOC107701138 other downstream 2079901 7680911 ~ 7753437 (-)
AMCG00016074 NA other downstream 4903438 4903856 ~ 4929900 (-)
AMCG00016176 NA other upstream 1000130 10834412 ~ 10847811 (-)
AMCG00016194 NA other upstream 1931870 11766152 ~ 11781547 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other upstream 1998146 11832428 ~ 11947322 (-)
AMCG00016211 NA other upstream 2488879 12323161 ~ 12329033 (-)
AMCG00016226 NA other upstream 3015596 12849878 ~ 12870560 (-)

Expression


Co-expression Network