AMCG00016170


Basic Information

Item Value
gene id AMCG00016170
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9812815 ~ 9813758 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016170
ATGACATTTTCAAACCTTACAGCTGAAGCCATAACAGAATTTTACATCACTGGTTTCAGTGGGACTCAGAATCCAAAGGCAGTCGGATGcatcattttaatcatttatttactgattttattGGGCAGCAGCGCAAACATCTACATCATCGCAAGGGACAAGCGTCTGCACACCCCAATGTACTTCTTCATTTGCAGTCTCTCTGTTGTAGACATCATCAACAGCACCAGCGTCAGCCCAAAAATTATCCTGGTGCTATTAGCTGGCATCACTGCAATCTCTTACAGAAGACAGGAAAAAATCTACAGCACTTGTTCAAACCACTTAATAGTagttgcttctgtttttgttcttccatTTGTCATAGTTATTGTAACTCACATAGGTTTGGTGTTGAGCGTCACAGAAcgtaatgtattcattattttctcttctctggGCCCCTGCTTGGTGAATCCTTTTGTGTACTGCTTCAGAACAAAGGAAATAAGAAGTCAGCTTTTCAGAATATTCAAGGCTGTGGCACCCAAACAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016170 True 537 mRNA 0.40 2 9812815 9813758

Neighbor

gene id symbol gene type direction distance location
AMCG00016168 NA coding upstream 15118 9791314 ~ 9797697 (+)
AMCG00016163 NA coding upstream 71397 9724589 ~ 9741418 (+)
AMCG00016160 NA coding upstream 154245 9657590 ~ 9658570 (+)
AMCG00016158 NA coding upstream 262599 9532102 ~ 9550216 (+)
AMCG00016157 katnal1,LOC107578067,LOC107697436,LOC107741157 coding upstream 290860 9510024 ~ 9521955 (+)
AMCG00016175 NA coding downstream 1020571 10834329 ~ 10842459 (+)
AMCG00016181 NA coding downstream 1437389 11251147 ~ 11252118 (+)
AMCG00016182 NA coding downstream 1555604 11369362 ~ 11370140 (+)
AMCG00016180 NA coding downstream 1576051 11389809 ~ 11390312 (+)
AMCG00016184 NA coding downstream 1701998 11515756 ~ 11530359 (+)
G11572 NA non-coding upstream 478956 9330891 ~ 9333859 (+)
G11570 NA non-coding upstream 498381 9313998 ~ 9314434 (+)
G11511 NA non-coding upstream 708633 9103625 ~ 9104182 (+)
G11510 NA non-coding upstream 711499 9100911 ~ 9101316 (+)
G11508 NA non-coding upstream 714888 9097269 ~ 9097927 (+)
G11672 NA non-coding downstream 150206 9963964 ~ 9964237 (+)
G11674 NA non-coding downstream 154784 9968542 ~ 9968783 (+)
G11678 NA non-coding downstream 195281 10009039 ~ 10009385 (+)
G11681 NA non-coding downstream 283940 10097698 ~ 10098122 (+)
G11684 NA non-coding downstream 322170 10135928 ~ 10136190 (+)
G11660 NA other upstream 213659 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 221166 9559464 ~ 9591649 (+)
G11545 NA other upstream 586570 9223412 ~ 9226245 (+)
G11509 NA other upstream 712779 9099420 ~ 9100036 (+)
AMCG00016136 NA other upstream 723782 9068281 ~ 9089033 (+)
AMCG00016174 NA other downstream 1030369 10844127 ~ 10958032 (+)
G11921 NA other downstream 2055067 11868825 ~ 11871735 (+)
AMCG00016202 NA other downstream 2179214 11992972 ~ 12005952 (+)
AMCG00016213 NA other downstream 2621378 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 2964466 12778224 ~ 12786899 (+)

Expression


Co-expression Network