Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016172 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 9904043 ~ 9904942 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016172 | True | 414 | mRNA | 0.42 | 2 | 9904043 | 9904942 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016167 | NA | coding | downstream | 31618 | 9863271 ~ 9872425 (-) |
| AMCG00016169 | NA | coding | downstream | 69761 | 9833338 ~ 9834282 (-) |
| AMCG00016165 | NA | coding | downstream | 136121 | 9767215 ~ 9767922 (-) |
| AMCG00016164 | NA | coding | downstream | 190925 | 9712133 ~ 9713118 (-) |
| AMCG00016166 | NA | coding | downstream | 192045 | 9707271 ~ 9711998 (-) |
| AMCG00016171 | NA | coding | upstream | 21 | 9904963 ~ 9919774 (-) |
| AMCG00016173 | NA | coding | upstream | 170513 | 10075455 ~ 10118219 (-) |
| AMCG00016178 | NA | coding | upstream | 1096798 | 11001740 ~ 11034263 (-) |
| AMCG00016177 | NA | coding | upstream | 1129324 | 11034266 ~ 11126738 (-) |
| AMCG00016179 | NA | coding | upstream | 1319514 | 11224456 ~ 11237516 (-) |
| G11662 | NA | non-coding | downstream | 207989 | 9695773 ~ 9696054 (-) |
| G11658 | NA | non-coding | downstream | 309090 | 9589735 ~ 9594953 (-) |
| G11650 | NA | non-coding | downstream | 360300 | 9543508 ~ 9543743 (-) |
| G11633 | hmgb1,LOC105901051,LOC103353583 | non-coding | downstream | 405290 | 9435802 ~ 9498753 (-) |
| G11571 | NA | non-coding | downstream | 589596 | 9314000 ~ 9314447 (-) |
| G11675 | NA | non-coding | upstream | 63635 | 9968577 ~ 9968783 (-) |
| G11677 | NA | non-coding | upstream | 85665 | 9990607 ~ 9991140 (-) |
| G11680 | NA | non-coding | upstream | 109258 | 10014200 ~ 10014451 (-) |
| G11688 | NA | non-coding | upstream | 332553 | 10237495 ~ 10237800 (-) |
| G11699 | NA | non-coding | upstream | 423777 | 10328719 ~ 10329089 (-) |
| AMCG00016134 | NA | other | downstream | 1076283 | 8823545 ~ 8827760 (-) |
| G11326 | NA | other | downstream | 1709611 | 8191546 ~ 8194432 (-) |
| AMCG00016119 | NA | other | downstream | 1780010 | 8119221 ~ 8124033 (-) |
| AMCG00016110 | ufm1,LOC107701138 | other | downstream | 2150606 | 7680911 ~ 7753437 (-) |
| AMCG00016074 | NA | other | downstream | 4974143 | 4903856 ~ 4929900 (-) |
| AMCG00016176 | NA | other | upstream | 929470 | 10834412 ~ 10847811 (-) |
| AMCG00016194 | NA | other | upstream | 1861210 | 11766152 ~ 11781547 (-) |
| AMCG00016203 | zdhhc20,LOC108438268,LOC106578454,LOC108256609 | other | upstream | 1927486 | 11832428 ~ 11947322 (-) |
| AMCG00016211 | NA | other | upstream | 2418219 | 12323161 ~ 12329033 (-) |
| AMCG00016226 | NA | other | upstream | 2944936 | 12849878 ~ 12870560 (-) |
