AMCG00016191


Basic Information

Item Value
gene id AMCG00016191
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 11751518 ~ 11764647 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016191
GACCAGGCTGACTATGAAGCCCCCGGTGCTGGGCAGGTGTGTCCTGTTAGCGCTGTGCTTCTTGCACTGTGAGGTAACGCTCAGTGCAAGTGAGTCTGTTCATTCCAGTGATGACGTGGTGCTGCTGAACCCCCCGGAGGAGCCTGTGTCCGGGTACCCCCTGCGGGTCCTCTACTCCTGCTCCGGCCCCACAGAGGTGCACCTGGAGGCTCTAGTGTCCTCCGAGACCCACAACGTGGTGAGGGTCTTCCGGAGGCGCTGGCGCTGTGACCCCGGACCGCCCCACGTCCGCGCCCTGAGCTTGGACCTGCCGGACTGGCTGGTGTACCGATCCGACTGGAGGATCCGCAGGTCGGATTGGGTGCTCAGTGTCCTTCTCCGTGCCTGGGTCACCGGGGAGAGACGCTCGGGGGGGTATAGACAGTCTGCGGCCCGGGCTCTGGTCCAGCTTCAGCCCCTGGACCCCTTCAGCCGCCCACTGAAAGACCACCCGCTGTGCCCCAGCTGGGATGTTGACCTGCTCTGGCGGATCCACAGAGACACTATCCCACAGTGTCCAGCAGAAGAAGAGGTCAGCCATCTCCTGTCATTTGTGTACGCCTCCACCGGAGAGAGATTTGGCATTGTCCGGACTCTGAACCACTATGGCAACAAGGTCCTGGAGCACCTGAGGCGGAGATCCATCTCCTTTCCTTGGTGTGTTTTCTCCACCTGGGTCTTCATGACCCGGCCTTGCAGGCAGCACTTCTGTGGACTGGTGCACCACGTGgacgacaacaacaactacGCCAGCCCTGTGTTATTCATCACCGACGCAGGGCAGATTCATATCCAGATGCACGGGGCGTCCGGCCAGGCAGGTGCCTTCCTCAGTCGTTTCCGGGTGCCGCAGTTCCAGTGGTGTCGCATTGACCTGGAGCTCAGGGGCCAAATGGCCAACATTACAATGGTGTGCGAAAAAGAGCAGCAACAGACCGTTCAGTCTACAGCTTACATGTTCAGAGAGGCATTTGTGTTGGACGACACCGTCGGCAGGTTTATTTTGGGAGGAGGACAGTTCGTCAGAGGGATCGAGGGCTTCTATGGCCCGTCTGCTTACTACCGGAATAGACTCCTGTCAGTCGGTGAGGTGGTTGGCCTTCCTGAGCCTATCAGCTCTGTGGATTTGACAGGATGGTACAAATCCTGTCAGCAATTTAAGGTGGATCTCCTAGAGAAGATGACTGGATACTCGGTGAGAAACCCTGAGAGCTGTGGAGACATCTACAGTAGCTGGGTGTCAGAAGATTGGACAGCCAATGCAGTACCACAGTGTTTCCATTGGGAGGCACCCCTTCCCCCTCAAAGACGCTCTGCTGCTCGAATTGCAGAGATACTGACAACAAGGAATGgGGGCAGGCAAGCGGAGCTGGGGTTTGTGGGGAGGGCCCTGTACTCTCTGGCTCTGCGTAGACTGACGCGGAAGGATGGCATCCTCAGAGGAAAGACCGTAATGCCACTCCTGCATCAAGCTGGGTGCCTGGGTGACAACCGGGCGCTTTTCCTGTCCTCCGTGCTGCATCGCACTGGACTGGGAATCAGGACACAGCCTGACAGGGCTGTGCTGCTGTCTCTCCTGGCGGCTCAGCAGGACTGGAGATTGGCGCTGCTGCACCTCGGGCACCTGCACCACCTGGGAGGGCCCGGCATCCCTGCCGACCAGCCCCTGGCCTACGCATATTATGCCAACATGGCGGTCCAGACCTCTGCAGACCGACAGAACCCCTCTCCCGGGCAGGTGTTTGTGGAATCGGTGCTGCTGAACAATGAGGATGCGTTGAAGGAGCAGACACATGAGAACGATGATCTCTTCCTGTGGCTCAAGTTTCAGGCGCGGAATGGGGCTGTGGACGCTCAGCAAACAGTGGGTCGAATGCTGTTTTGGGGCCAGCAGGGGGTGTCTCCTAATATGCAGGCAGCTGTTAAGTACTACGAGAGGGGGGCCACGAAGCACGAAGACCCCGTATCCATGTATGACTACGCCATAGTCCTGCTCAAGGGACAAGGAGTAGAACAGGATATCCCAAAGGCCGTGGTGTTCTTGAAAAAAGCTGCAAAACAGAACTTCGTCCCAGCAATCAACGCTCTGGGCTGGTACTATGAGAAGTACGAGCAGGACTACAGGAGAGCAGTGGACCAATGGGAGCAAGCTGATGCCATGGGGAGCTCTGAGGCCGCCTTCAATCTAGGGATCATGTACTCTCAGGGCCTGTATCCCGGGAAACCAGTGGACCAGTATAAGGCCTACACCTACTACCTCAAGTCAGCCCAAAATGGACACATAGATGGAGCTATCCAGCTGGCCGAGGTGTGGATGAATGGGATTCCTGGCAGGGTGAGCCAGCAGCCCTTGGACGCAGTGCGGTGGACCAAGTGGGCATCAGAGCAGAATGGTTACCTGGGAGGGGTCCTGAGGAGAGCCCTGGAAGCCTATTTACGCCAGGACTGGTCAGCAGCTTTAATCTACTATCTTACGGCAGCTGAGGCTGGGTTCACTGTAGCGCAGTTTAATGTGGGATACCTGTGTGAACACAACTTTGGAGGCCTCCTGAGACCCTCCTTCATGTCAGAATGTATGTGGCGATACTATAACCTGTCCACCCAAAGCCAGAATCCTGTTCCTTACGCCCTGATAAAGATGGGGGATCTAGTTTATGGGGGTCACAAGCTGAGGAAAAGAGACCTGAGCACAGCGGCAGAGCTGTACAAACGGGCTGCTCTTCAGAATGACCCCCAGGGCTGGTACAATCTGGGGCTGCTGGTCCAGGAAGGGATGGAGCTACCAGGACCTCTGCTGTCAGAATTAGGCCTGCCAGAGACGCCCAGGAATGACAATTACACTGTGCTCACATCTCTGTGTCGGGATCACCAGGAAAAAGACTCGTACCTTCCCTGCTCTTTGGCTTTGCTCAACGTCCACCTGCAGCTACTGTGGAAACTCTACAGCGCCACCCTGACACTCTCCACTGTTGCCCTGGCAATTATCTCCCTCCTGACCACCCTCGCCGCCCTGGGAAGGCTCAGGGGGGCCGTTTCCCTTGGTGGCTAGGAAGCATGAGCCCACAGCTACCAGCGGTACAGGATAGAGGGACAAGGGGGGTAGGGAATAAGACTGTGCCCAGAAAACACTGCTGACAGCTGAGAAGATGTTTAGACATTTATTGACAGGTGGACCATAAGAACAAGGGAGCATATGGCTACCACTGCCCTCTGATTTTGGCTGTTCTCAATTGTCCTCTTGTACTGAGGGATTAATCCCCCTGAGGGAGCTCTCTGTTTCAAAGACTGACTGCCTGACCTTCGTAGAAACACTCCACAATGTTCTCTACCGCAAGAGTTCAGTCAACCGCTCTGATACGCAAACAGCTGAGCTAATGTTGCTTCCCTGGGGTTCTGGGAAAAGTGCAAATCTATGAATCACATGATCACCTGAATTGTCAACATTCAAATGTCTGGTATAGGAATTCAACTCTATAAACCgcttttcttgctttcttgCATTTGGTTGTTGGCTGTCCTATTTAAATGTGTACCTTCTTATATAAGTTCATTTGGTTATGTAATTCTTTGGAAGGGTTAGCAAAAGGGACAAAAACTAAACTTGTGTGAAAAAGGCAAGCCTGATTTAATGCATCGACGTCCATCTGGAAAAGTGTTTACATAATGACAACtcagttttaattataaatcatttGCACCTATAAAGGGAAGCACTCAGTTGTTCCTGGTTGTcgatgaaaaaatatgaaatggatTAAGagcataatatattaattaaagttaTACAAAGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016191 True 3832 mRNA 0.54 22 11751518 11764647

Neighbor

gene id symbol gene type direction distance location
AMCG00016192 rrm1,LOC107684690,LOC106920178,LOC103364515,LOC103136300 coding upstream 2147 11741483 ~ 11749371 (+)
AMCG00016193 NA coding upstream 10141 11733878 ~ 11741377 (+)
AMCG00016190 LOC102214188,LOC103353587,LOC101465674 coding upstream 34478 11680800 ~ 11717040 (+)
AMCG00016186 NA coding upstream 108108 11627693 ~ 11643410 (+)
AMCG00016184 NA coding upstream 221159 11515756 ~ 11530359 (+)
AMCG00016198 NA coding downstream 17533 11782180 ~ 11791632 (+)
AMCG00016196 NA coding downstream 32041 11796688 ~ 11800796 (+)
AMCG00016197 pcyt1b,LOC107590340,LOC107721854 coding downstream 73025 11837672 ~ 11847864 (+)
AMCG00016205 NA coding downstream 292053 12056700 ~ 12109384 (+)
AMCG00016206 NA coding downstream 408421 12173068 ~ 12205659 (+)
G11851 NA non-coding upstream 21292 11729600 ~ 11730226 (+)
G11850 sc6a7 non-coding upstream 24095 11726942 ~ 11727423 (+)
G11849 NA non-coding upstream 27917 11723197 ~ 11723601 (+)
G11848 NA non-coding upstream 28960 11722068 ~ 11722558 (+)
G11847 NA non-coding upstream 31110 11719779 ~ 11720408 (+)
G11905 NA non-coding downstream 52357 11817004 ~ 11819065 (+)
G11914 NA non-coding downstream 83638 11848285 ~ 11851621 (+)
G11953 NA non-coding downstream 263652 12028299 ~ 12029121 (+)
G11988 NA non-coding downstream 441701 12206348 ~ 12207474 (+)
G12009 NA non-coding downstream 497404 12262051 ~ 12265709 (+)
AMCG00016174 NA other upstream 793486 10844127 ~ 10958032 (+)
G11660 NA other upstream 2152362 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 2159869 9559464 ~ 9591649 (+)
G11545 NA other upstream 2525273 9223412 ~ 9226245 (+)
G11509 NA other upstream 2651482 9099420 ~ 9100036 (+)
G11921 NA other downstream 104178 11868825 ~ 11871735 (+)
AMCG00016202 NA other downstream 228325 11992972 ~ 12005952 (+)
AMCG00016213 NA other downstream 670489 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 1013577 12778224 ~ 12786899 (+)
AMCG00016241 NA other downstream 1506937 13271584 ~ 13389636 (+)

Expression


Co-expression Network