AMCG00016196


Basic Information

Item Value
gene id AMCG00016196
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 11796688 ~ 11800796 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016196
CAGCCCGTCTCTCAGACAGCCACCCTGAGCAGTATGCAGCAGCAGAGAGGAGCCAGCGCCGCCGCAGGGCCCGGGACCATGAGACTGGTTGTGACAGTAGCCCTGTGGGGCACACTCTGCCTCCTCCTGGTGGAATCAAGAACAGtGCGGCCTCCCAAGATAAAAGCACCAAAGCCTGGTTTAATCCAAGCAACCCCAGGAACGAGTCTGACGGTTTCATGCACGGCTGATCCGGGTTTCCCTGATGACTTCGTGGTCATCTACTGGCTGGTCAACAGCACTTTCATCGAGACCGCGTTCCCCAAAGGCCGGGTCAAGGAGGGGGAAGAGAAGACATACACCATCAACAATGAAGCCTTCATCCAACGGAACCTGACTTTTTCACCAACAcataataaggattttaaaaatatttttacttgtGTGGTCAATAACGCAGCTGGCCTTGCCAAGGTGGACATCAGACTGAgtaAGAAAAGCAGGAAAGGCAAGAAATCTGCAGGGCAATCcaggaaattgaaaataaatgacataatGAGAAGGAACATGATATAAGATAAATGTCTCAATTCATGCCAAACCTCTCCCTGGAAACTCAATGCAGTTGTTGTACAGAGCCCACAGTGCTGGATTTCTGAAGccactttaatatattttgaatgtatgttCAATTCTGAATACGAAAATGTTATAACAtctgaataaatattgtaaaagatAATACTATGAAGGCTGAGATGGATTTTGAACCCTTGGGAAAACAGAGACATTGTCACATGCAGAAGCCTAGTAAattgtcaaaatatatttttgccaaGGCTGTGAAGTGTTTATGATTTACATGTTAAACTTGGTTAATGGattaatttaacataaaacTGATTCTCACCAAGAATATtttcatgcaaaacacaaattctCTCTTTTGAATCAGCTACTGGTGTGTCAAGAGTTAAGCAGCAATGTTATGGTATAGCATTTGCAAATAGTTCcttattaacaaaaataacaagggggtgggggtgcacaAATTAAAAGGTGATTGATGGCCCATTTAATGTGGCATTTTATGAGATAGTTTATTCCACATCCGAAGCTTTAATTACTCTTGCTTCTCTACAATATGGAGTCAGCACTCTGATGGCaccattcatttgaattaaaaaatcaatAGGTCTCAAAGTGCAGTTTATTTCAGCTGGACAGTGAAAGATACAATGAGGAAAATTGAGAGATGGTAAAGTgatagaaaaacaacagatgtAGGAAATGCTAGCCTATTGCCTGCAATACCACAACTATCCACAAGAGGCTACCTGGTTAAAGACCATGAACACAAGCAAACCATCATTATTGGATAAGAAGGATATACTGTAGGTATACCATTTTGTGCAACAtgtttcacccccccccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016196 True 1416 mRNA 0.42 7 11796688 11800796

Neighbor

gene id symbol gene type direction distance location
AMCG00016198 NA coding upstream 5056 11782180 ~ 11791632 (+)
AMCG00016191 NA coding upstream 32041 11751518 ~ 11764647 (+)
AMCG00016192 rrm1,LOC107684690,LOC106920178,LOC103364515,LOC103136300 coding upstream 47317 11741483 ~ 11749371 (+)
AMCG00016193 NA coding upstream 55311 11733878 ~ 11741377 (+)
AMCG00016190 LOC102214188,LOC103353587,LOC101465674 coding upstream 79648 11680800 ~ 11717040 (+)
AMCG00016197 pcyt1b,LOC107590340,LOC107721854 coding downstream 36876 11837672 ~ 11847864 (+)
AMCG00016205 NA coding downstream 255904 12056700 ~ 12109384 (+)
AMCG00016206 NA coding downstream 372272 12173068 ~ 12205659 (+)
AMCG00016207 NA coding downstream 440847 12241643 ~ 12261142 (+)
AMCG00016215 NA coding downstream 585182 12385978 ~ 12397053 (+)
G11851 NA non-coding upstream 66462 11729600 ~ 11730226 (+)
G11850 sc6a7 non-coding upstream 69265 11726942 ~ 11727423 (+)
G11849 NA non-coding upstream 73087 11723197 ~ 11723601 (+)
G11848 NA non-coding upstream 74130 11722068 ~ 11722558 (+)
G11847 NA non-coding upstream 76280 11719779 ~ 11720408 (+)
G11905 NA non-coding downstream 16208 11817004 ~ 11819065 (+)
G11914 NA non-coding downstream 47489 11848285 ~ 11851621 (+)
G11953 NA non-coding downstream 227503 12028299 ~ 12029121 (+)
G11988 NA non-coding downstream 405552 12206348 ~ 12207474 (+)
G12009 NA non-coding downstream 461255 12262051 ~ 12265709 (+)
AMCG00016174 NA other upstream 838656 10844127 ~ 10958032 (+)
G11660 NA other upstream 2197532 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 2205039 9559464 ~ 9591649 (+)
G11545 NA other upstream 2570443 9223412 ~ 9226245 (+)
G11509 NA other upstream 2696652 9099420 ~ 9100036 (+)
G11921 NA other downstream 68029 11868825 ~ 11871735 (+)
AMCG00016202 NA other downstream 192176 11992972 ~ 12005952 (+)
AMCG00016213 NA other downstream 634340 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 977428 12778224 ~ 12786899 (+)
AMCG00016241 NA other downstream 1470788 13271584 ~ 13389636 (+)

Expression


Co-expression Network