Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016198 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 11782180 ~ 11791632 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| id | description |
|---|---|
| K15698 | RNF121_175; RING finger protein 121/175 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016198 | True | 1032 | mRNA | 0.54 | 8 | 11782180 | 11791632 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016191 | NA | coding | upstream | 17533 | 11751518 ~ 11764647 (+) |
| AMCG00016192 | rrm1,LOC107684690,LOC106920178,LOC103364515,LOC103136300 | coding | upstream | 32809 | 11741483 ~ 11749371 (+) |
| AMCG00016193 | NA | coding | upstream | 40803 | 11733878 ~ 11741377 (+) |
| AMCG00016190 | LOC102214188,LOC103353587,LOC101465674 | coding | upstream | 65140 | 11680800 ~ 11717040 (+) |
| AMCG00016186 | NA | coding | upstream | 138770 | 11627693 ~ 11643410 (+) |
| AMCG00016196 | NA | coding | downstream | 5056 | 11796688 ~ 11800796 (+) |
| AMCG00016197 | pcyt1b,LOC107590340,LOC107721854 | coding | downstream | 46040 | 11837672 ~ 11847864 (+) |
| AMCG00016205 | NA | coding | downstream | 265068 | 12056700 ~ 12109384 (+) |
| AMCG00016206 | NA | coding | downstream | 381436 | 12173068 ~ 12205659 (+) |
| AMCG00016207 | NA | coding | downstream | 450011 | 12241643 ~ 12261142 (+) |
| G11851 | NA | non-coding | upstream | 51954 | 11729600 ~ 11730226 (+) |
| G11850 | sc6a7 | non-coding | upstream | 54757 | 11726942 ~ 11727423 (+) |
| G11849 | NA | non-coding | upstream | 58579 | 11723197 ~ 11723601 (+) |
| G11848 | NA | non-coding | upstream | 59622 | 11722068 ~ 11722558 (+) |
| G11847 | NA | non-coding | upstream | 61772 | 11719779 ~ 11720408 (+) |
| G11905 | NA | non-coding | downstream | 25372 | 11817004 ~ 11819065 (+) |
| G11914 | NA | non-coding | downstream | 56653 | 11848285 ~ 11851621 (+) |
| G11953 | NA | non-coding | downstream | 236667 | 12028299 ~ 12029121 (+) |
| G11988 | NA | non-coding | downstream | 414716 | 12206348 ~ 12207474 (+) |
| G12009 | NA | non-coding | downstream | 470419 | 12262051 ~ 12265709 (+) |
| AMCG00016174 | NA | other | upstream | 824148 | 10844127 ~ 10958032 (+) |
| G11660 | NA | other | upstream | 2183024 | 9598815 ~ 9599156 (+) |
| AMCG00016159 | ubl3,LOC107578048,LOC106604009 | other | upstream | 2190531 | 9559464 ~ 9591649 (+) |
| G11545 | NA | other | upstream | 2555935 | 9223412 ~ 9226245 (+) |
| G11509 | NA | other | upstream | 2682144 | 9099420 ~ 9100036 (+) |
| G11921 | NA | other | downstream | 77193 | 11868825 ~ 11871735 (+) |
| AMCG00016202 | NA | other | downstream | 201340 | 11992972 ~ 12005952 (+) |
| AMCG00016213 | NA | other | downstream | 643504 | 12435136 ~ 12461265 (+) |
| AMCG00016221 | NA | other | downstream | 986592 | 12778224 ~ 12786899 (+) |
| AMCG00016241 | NA | other | downstream | 1479952 | 13271584 ~ 13389636 (+) |
