AMCG00016201


Basic Information

Item Value
gene id AMCG00016201
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 11818088 ~ 11836421 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016201
ATGAGGAAATGGAATCGAAACCAGATGTGGGCAGATGCTACGTGCTACGTCATCGACGCCGTGTACGTCATCAACAGTCTCAACCTGGATGACCCCGTCAACAAGCTGTCCAGCCTGCAGGATGGCAGCCTTTTAGTAAAGCTGATCTACAGGCTGCAACTGCAAGTGGTGGTTCTCCTCCTCTACTACTCCAACATGTGTGGCACGTATCAGGTATTTGAGAAGCTGAACTACAAGACGCAGGCTGAGCTGGCATCTGTCCTCCGATTTGTTCTCGATAATGAGGAGAGCCTTTACCTGAACAATAACTTGGAATCCTTCCTTAAGAGAAAagTGTCTCAAGTCACTCCAGTGTGTCAAGTTATTCCAGTGTCAGTGAGGAGGAATCCCCCATCatcaaaaggaaaaggaaacctGAAGTCCAGTTTCTGGACCTCCAGACTGTGGCGACAAGTTCTCTCTCCCATCCAAGATGTCCTGAAGACACCGCAGTTCCAGATGAGGAAACTTCGTAAACAGCTGTATCAGGAGAGGAATATGAGGGATGAGCTGGAAGTGGAGCTGGCAAACAGTTGCAAGATCATTACCGAGAGAGAGACCCAGCTGTCCCTCCTGCAGCAGAAAGTTCACAAGTTGATGAGGCACAATAATGAGCAAGACCAGGGACCCAATGAACTGGAGGAACTCGGCAACAAATATGAAAGTGTGGTGAAACGCTTGCAAGATGTCCGAAAACAGTGCCAGGACCTGAAAACCAACAAAGGTCAAATGGAGAGAAAGATTGACCAGTTGACAGAGGAGAATGGAAATCTTTCCTTCCAGATGAGAGATTTCCTAGTTCGTCTTACAGAAGCACAGGCTGCCGTGGACAAGCTGAGTGATGAGCAGGAACAGTCTGTGAAGGAGTGGGAGGCGAAACGCACACAGCTCGAGAGTGCTCTCAACCAGGCTATTGCAGACAAGGAGTGTTTTTCTGAACAGATTCTTATTCTTCAAGGGAAGATCTGTCAACTTGAAGATGAGCTGAAGAAAGAGCAGTCTCAGAGTAGGGTGGAAGGAGAGGTCATGGGAGATGTATTAGAGATGGAAGGCTTGAAGCAGGAGGTGGATGATCTTACTGTGAAGGTGTCTCAGCTTGAAGTTATCATAGCCAGCCTTGAGCAAGAGAAAGCACAAGCTCTAATGGACCTGAACTCTGAAAGAGCCAACTTTGAAAGTGAGAAGTCACATCTCACTGTGGTCATCGCTGGGCTGCAGCAGGCCCTGTCTGAGCTCGGGTGCGAGAAGGAAGAGCTGCAGCGAACTTCCAGGGAGCAGCAAGAGAGGCTGACAGCCCAGGTTTTAGCTCTGAATGCTGACATTGATAAACTGGCTGAGATTGTAAAACGCAGTGAGCTGGAAGTTGCAGGCCTGAGCCAGAAGGTGGAGGAAGAGCAGAGGCAGAATGGGCAGCTAGTCCAGCAAATGGAGAAGAAAGAGCAATCTGCTCTGGAGACTATTCATGGACTGAAGAAACAGGTGGATGATCTTGGCAGTGCCTTGAAAGTGAAAGAGGAGGAGGCCGTCTCTAGTACCCAGTTATGGGACATGGAGAGACAAGAGAGCGGCCGTAGGGAGATTGCCTTGCTGGAAGCGTCCAAGActgcagccagagagagagatgcagctTTGACTGAGTACCGCCATTTCCAAAaagacaaagaacaaaaaattgGGGAACTTGGCCAACAGATCCACACTCTAGAGGACCAATGGAAGGCCGAACAGAGTCTAGTCTCCAAGCTGAGAAATGAGAAGGGTGAGCTGGAGCAGAAGGTTGCAGCTTTGGAATTGGCCATCAATGAACTTCGCCTCAAATGTCAGAGCCTGGAGTCTAAGAGCGAAGCTCAAAGATGCAGCAATTTGGAGGCCATTGAAACCCTGACTGTGAGACTGCAAGACGCAGAGAAAGAGCTCCAGCACTATGAGGGGAAGTTAGTCCATCATTCTGGGGTAATTGAAGAGAATGGTAATCTGCGGAATCAGCTTGCTACTCTGGACGACACTGTGGGAAACCTGCGTGTTCAGATTGAGGCTGAGAGGAGAGGGTTCGAAGAGACTCGTTCTTTGGAGCTCCAGAGGGTCTGCCAATTGGGAGAGGAGGTCAAAGCATTGCAGGATAGGACCCAGCAAATGTCAACTGACTTAGAGTTTGCCCACCAGGAGCTGAAGAAAGAGCAACAAGAGAAACTGACTGCACAATCTTCTTTGGAAAAGCTGAGGGAGGAAAGTGGAGAGATGATAAAAGCTCTATCTGCAGAGCATGATCAAGCATCTTTAGCTATCAAGGCTAAAGAAGCTGAAATTAGGAAGCTGAGCTCTGAACTGGGATCTCTTGCAGACAAGTTGGCTTTAACAGAAGAAACCAAGGGCCAGGAGTTAGCTGCAAAGAAGGAGGAAATTACAAGGCTTATCCAAGAGATGGAGGGAACCCTAGAAAAACTGGAAATGGTCAACAAGGAAAAGGAAGACATGGAAAGTCGTCTTCAGTCCAGAATTGTGGAACACCAGGGACAGCTCTCGGCACTGCGTGAGGAGTTGGTTGATGTTCAGGGAACAGTGAGGCAAAAGGAAAGTGAACTCGAAGTGATTCTCAATCTGCAAAGGGAGACCTCTCAGCTGGAGGAGTTCCAAAAACGCTTGGCTAAAGAAGAGAAGGAAACTCAGTCTGTTGCTGCACTGGAGCAAGAGTTGGCAGAAGCTCGAAGACTGATGTCAGAGAAGGGCACTGCTTTTGAAAAGCAAGCAAACCAGCTGCTTGATCTTCAGAGGGAACTTTCACTTCAACAAGATACAACAGTCTCCTTGGAAAAACGCCTGGAGTCTTCGCAATCCAAGTGCAGTGAGCAGCAGATGCAGGTGGAGAAACTTTCCACAGAGCTGAAAGAGACCCGCTCCTCCAGTGGTCTTCGTGAGGCAGCCTTAAAACAGCAAGTAGATCGTTTACTGCAGGAGCTTGCGAGGCAAAACAGTGACCTGGAAACACTGAAGCAGGAAGTGTCAAACAGGAAGGAAGAGCAACTGGAGAGGGATGCCCTCAAGAAACgggcagctgctgcagcagaaGAACTGGAGAAGCTGCAGGCTGAATCTCTCATTGCAGCCTCCGTAGCGTCAGAAAAAGACATTGTGCTGCAGAATTTGCAAAAGGAAATCCAAGCTgtcaatgaaaaatatgaagagCTGCAAGAAAGGGATGTGGATAGAAGCAAGTTGGCGGACACCTGGGAATTAAATCTTCAACAGCACAATGAAACTGTACAGAGACTGCATGAGGAAGTCTCTGCTGCTTCCTCACTTGCCTCTGAAAGACAGCAGACAACTGAGACACTGGAGAAGGAACTTTCTTCCTTGCAACAAGAAGTGGAAATGCTGAGACACGGAAACCTTGTGACTTCAGCACTAGTCTCCGAGAAGGATTCCCAGCTCTCCTGTCTTCAGGAAGAAATCAAGAAACTGAAGGAGCAGGAAAATGCAAGAAATCTGGAAGCTGCCATGGAGAGAGCTCAGCAGAAAGAATTGCAAAGTACCATAGACAGGCTCCAGGCGGAAGTGCTAGCTGCTTCCAGAGCAGTTGCAGTAAAGGAATCTCAACGTAAGGAGCTGGAAGAATCAATTTCTGTTCTTAAGAAGGAGGTTGTCTCTGCTTCCTCCGAGAGAGAGCAGGCAGCTGGAATTTTCCAGACACAGCTTGCCTCCTTGCAGCAGGAGAACAAGCTCATGGCTACTGAAAAGGAGTCATTACAGCAGGAGCTGGTGCTGTTGAGAAAGACGGAAGCAGAGTTGTGTGACCTTCAACAGGAGCTGACCAACGCTCAGGCCCTAATTGGGGAGCTGATGCCAACTAAACGAAAGTGCCAGCAGCAGCAAGCTGAGCTGTGCCTGGCCCAGGCCAAACaccaggaggagctggagcagcgAGATCGAACAGCTGCCACCTTGGATAATGAGCTACAGCAGGCCAAAGATGAAATCTCTGTTCTCCGGCCACTGAAAGACCTAATCGCAGAACAAGAACTTTCCCTCCAAAAACTCCAGAAGGAGAACATGACCTACAGGGAGCAGGTGTGCAAGCTGCAGCAGGCCAACAGCCAGCTGACCAGTGAGAACCTGGAGATGTGCTCTGATGCAGAGGTGGCCATGAGGGAAGTGGTCCACACCCAGGAGCTGGAGAAGATCAAAGGAGAGCACCAGAGACAGATAGCCTCTCTGAAGGAGAAGGTCCGAGAAACTTGTGAGAAGTATAGAAGTATAGAAGAAGAGGACACCAAGCAGAAGGTTCTGGACGACAGGCAGAAGTTCcaggaggagagaaagaagcTCATTGTTCAGGTAGAGGAGCTGACCAAGAAGCTGGGACAGCAGGTGTGGGAGGCAGAGGTCAAAGAACTCAAGGAAAAGCTGACCCGCAGAGACGAGGTGCTGGAGCACTATAAGGCACAGGTGGAGAAAGCGAAGATCCACTATTCTGGCAAGAAGCAGCAACTGCAAGAATCCATCGAGAAGGTCCAGGCCCTGGAGACCGCACTGGAGGGGAGCCGGGGGGAAAGAGATGCTCTGAAGGCTGAGAGAAAGAGGATGGAGATGGAGCTGCACCAGGCCCAGCTGTCTGCAAAGAACCTGTCTACCAAAGTCAGCAGTCTGGAGGCCCAGgtggactTTGCAGACCGGCAGCTTAGGGAACACAAGAAGCTCCAGGGGAGTATTGACACCTTGAAGACCCAGAAGTCTGTGTGCCCCAGTGTCCCAGATAAATCACAGGACACCAGCAAGGACAGCTTGGAGCTTAGCCCGGATGAGGACGACACCCTCGTCTCTAAAAGgaagaggagagaagacAAGACTCCTGCAGCGAGGAGCTCCGAGAGGCTGGCGGCTCAGCGGCGTGCCCTCAGCCGGGAGTCCTTGGATACCCTGTACTTCACCCCCATGGCCCTCCGCTCCCAGACCAGACTGGAGAGCAGCATCACCTCCCTGGGGGACCTCACTCTCGACTCTGCCAAGAAGACCCAGTCTGCGCGCCGCCGTACCACACAGGTCATCAACATCACCCTGACTAAGAAGACTCCTGGAGCTCCAGAGCCCGAGAACGAGTCTTTCTTCAGCCTCCATGCGGCTCAGTCCCATCCCAACCTCTGCTCCCAGCGGGGAAGACCCCTGTCCATGGCCTCACTGTCCTCGCGGTACAGTGTCTCGCAGGAGTTGTTCAACGAGAGCTCAACCAGTGAACAGCTGCTCAACCTGCCTGGGTACCGCCCTGGCACTGCTAACACCTCGACCGCACACCGCAACACCAACACGTTTGTGGTCGGCTCTCAGAATGAACCGGAGCACACGGACGACTGGATGCGCCTTGCCGAGCTGCAGGCCAGGAACAAGACCTGTCTGCCCCATCTCAAGAGCAGCTACCCTCTGGAGGGCAGGCCCAGCATTGGAATCGCCTCGCTGTGCATCACGGATGATGAGGTACGCATGGGAAACCCCGACGACACCATCCGTCGGGCCTCCATGCTGCCCTCCCAGCTCCATGACACCCTGGCGCCCCACCGTATGTCCATGCAGCCCGGGCTGACTCGGGAAGGCATGCCCTCCCACCGGGCGACCATGCTGCCCAGCCAGATCAGGGAGACTGTGTCCTCTCATCGTGCCTCTTTGCTGCCCAAGCCCTCTGCCCAGCAGTCCTGGCAGACCACCTCGGGCACCTCCAAACAGGTCAAACGAACCACTGATGAGCCTCAGAACGGAGCGGACACTCCTGAGTCCAAGAAAGCATTGACCAGCTGCTTCCCACGGCCCATGACACCCAAAGACAAGAACGACCGTCGCTGGACCATGCAGAGCAGCCAGAACAAGCCGCCCGTGTGCCAGgATGAACGCCGCCAGTCCATGGCGTTCAGTATCACCAACACCCCCAAGAAGGCTGGCAGTCTCCTCCAGCGGGGCTTCAATAAGATGAGGGGCAGCACACGGAAGTCACCCACTTCCACAGGCAAAACGCCCCGAAAGTCCCCCCGCAGGTCTCCCCGGATCGGCAGCGGCAAGTCGCCCAAGAACACTGCAAGCGCCAAGAAGAGTATGATTAGAAAACCTCTGAAGAATATGAAGGTGTAAATCTACACTGTGGAGGAGGTGGAGATGTGGGCAAGTGAAGGCGGGCAGTTCCCTTCCTGACACCTCGTTCACCAGGCTCCAATTGCTACGTTTCTATCCTCTGACGCTCTTGAACCCAATCCTGCAGCTGCTTCAACAcctttatctgttttttttaatatcgtATTCAGCTAAATCAAATTAAGGATGCTGGGAAGGACATCCTAAAATCAGTGGCGTAATGTGCAATTAAACATTGGGGGGGTGTGGAGGCAGGAGTACCTGCTGTcccattcctcctcctccctccccttgtAAATATCTTTCCATtatcttttctatttttattcccCTTATTTAGTgcattttttcataaataaaatgttctgtgcattattttgtattgtcaaaTGACTGCCCCTGCTCTCTTGTGTGCAAATCAGCTGTTAAACAGACCCGGCTGAGAGAGCCCGTGTGGGAGCCGCCCGCTTTATAGGACGTCCTGCATCGGATCCAAAGTGCTCATATTGATATTTACACACTTCAGATTTTAAATGTCTGCCAGTGCATGgctgtggttttaattttacatgAGTTTTATGAGATTTTGCAGGTTTAAAACTTGTTTTGCTACAATTTTGTGAATTTTGACCGATTTAAGTGATCTCTACATCAAAGCTTTTTGATAGGAACTATACAATTCTTTTCACAAAGCATGGAGCCCATTAAAAATATGGGTGTCTGAGATCTGATCATGCAAAATGGACTGGAGGCAGAAACTGCATCAGTATCTGGAGAGGAGCAAACACTACTAATTGTGCTGAGAGGATCGAGGGTTTCTATTCCCTGGCCGCACCAGTACATTGGAGTTTAAAACCTAATTTGTCCTTTCATatccttttgtatttttctaagaAAGGCACACTGACTTTAGTGTtgcatcttttttctttttttttttttt

Function

GO: NA

KEGG:

id description
K16808 NUMA1; nuclear mitotic apparatus protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016201 True 7093 mRNA 0.51 24 11818088 11836421

Neighbor

gene id symbol gene type direction distance location
AMCG00016195 LOC106953351,LOC103475760,LOC103145618,LOC106922176,LOC107098229 coding downstream 88291 11719415 ~ 11729797 (-)
AMCG00016187 rhog,LOC106613190,LOC107749931,LOC107667433 coding downstream 155253 11647731 ~ 11662835 (-)
AMCG00016188 NA coding downstream 195029 11604817 ~ 11623059 (-)
AMCG00016189 LOC107685497,LOC106603565 coding downstream 226991 11583814 ~ 11591097 (-)
AMCG00016183 NA coding downstream 342296 11471726 ~ 11475792 (-)
AMCG00016199 pdk3,LOC106578452 coding upstream 11863 11848284 ~ 11866869 (-)
AMCG00016200 NA coding upstream 32366 11868787 ~ 11886193 (-)
AMCG00016204 LOC104943497 coding upstream 69655 11906076 ~ 11943652 (-)
AMCG00016208 sacs,LOC106612984 coding upstream 371727 12208148 ~ 12236522 (-)
AMCG00016210 LOC106567911,LOC102798362,LOC104951736,LOC105923239,LOC107101883 coding upstream 427853 12264274 ~ 12296060 (-)
G11865 NA non-coding downstream 79489 11738345 ~ 11738599 (-)
G11858 LOC106904821 non-coding downstream 100671 11701591 ~ 11717417 (-)
G11814 NA non-coding downstream 334295 11483562 ~ 11483793 (-)
G11807 NA non-coding downstream 417670 11400207 ~ 11400418 (-)
G11805 NA non-coding downstream 429963 11387731 ~ 11388125 (-)
G11996 NA non-coding upstream 402364 12238785 ~ 12239014 (-)
G12041 NA non-coding upstream 516739 12353160 ~ 12353381 (-)
G12046 NA non-coding upstream 518254 12354675 ~ 12355364 (-)
G12058 NA non-coding upstream 551377 12387798 ~ 12391408 (-)
G12096 NA non-coding upstream 802072 12638493 ~ 12638698 (-)
AMCG00016194 NA other downstream 36541 11766152 ~ 11781547 (-)
AMCG00016176 NA other downstream 970277 10834412 ~ 10847811 (-)
AMCG00016134 NA other downstream 2990328 8823545 ~ 8827760 (-)
G11326 NA other downstream 3623656 8191546 ~ 8194432 (-)
AMCG00016119 NA other downstream 3694055 8119221 ~ 8124033 (-)
AMCG00016211 NA other upstream 486740 12323161 ~ 12329033 (-)
AMCG00016226 NA other upstream 1013457 12849878 ~ 12870560 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other upstream 1706927 13543348 ~ 13559184 (-)
AMCG00016281 NA other upstream 2583935 14420356 ~ 14427290 (-)
AMCG00016293 NA other upstream 2948777 14785198 ~ 14791969 (-)

Expression


Co-expression Network