AMCG00016212


Basic Information

Item Value
gene id AMCG00016212
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 12360575 ~ 12376528 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016212
ATGTCTCTGAGCAACCCAGACGCAGAGAGGGAGCACAGCCCCACAGGTGAAGGAGGGTCAATGGAGAGCCCTGACACTACAGTTTTCAGCTCCTCACATGAAAACACTCCCATCGGGGGTACCCAAGCCACGGTGACGCCAGGTCTGACCCCGAATACTCGGACGACCCGGAACAGGAGAATAATCCaaacacaaGCCCGAAACAAGCCAGCCTTTAAAGTGCTGCTGCCGTATGGCCGCTCCATGCTGGGCCGCAAAGCTCACAAGTTCCCCCAGGGCCAGGGGACGGGGCCCATCAGTGGTCCCAGGAGGCGCATCCTGCCCGCCCATCTGCACCGCATGAAGACTGTGGGCAGCCAGGTTTGGtacctgcagcagcagctgaagGCAGTCACCCTGGAGAACCGGCTACTGAGGAGGCTACAGGGCCAGCACTCCCACGCCCTGCGCCAGTTCCAGGAGTCGCACAGCTGCCTGCCCCAGATGGTGGCCAGGCACAACACCGAGGTGCGGGTCCTCAGAGAGCGCCAGCTGCAGCGTCTGTCTCAGGACCGCCGCCTGGAGGACAGGGAGCTGCTGACACGGCGGATCAGCCTGCTCTCACTGGACGCCGATGTCAAGACCAGGAGGATACAGGAAAAAGACCGCAAGCTGGAGATTCAAAACATCTATTCACTGAGAATTCAAGAAGGCTCTCAAAATAAAGATGTCACTCCAAAACGACAAAAAAAGTCCAAATGGGTTCAGACGGATCATCTCCTGGATCTACCCATTGCTCCTTCCTGCTCAAGACTTGAGAGAACGGATGAgcccagagagacacaggaaatgGAACAGATGGCCATGAGCAAAGAGAGAACAGCAGCATACAGAGCAAGGATCAATAACGATCCTGCTAAGAGAGAGTCCTTGCTGCGGCATGAGCAGAGGCCAGACTTTGACCTGTTGGACCCacactgccacctgctggacaATGAATACAATTCTCAGCAGGACCCTCACCTCAAGGGGTTCTACAAGAACAAGGCCATGGAGAAGAAAGTCGCGTGTTCCTTGAAGGACTTTAATCGGTACAATGACTACCTGAAGACAGTCAAGATGGACTGGGAGAAGAGCTACAGACAGAAGCAGAAGGAGCTCGTGAAACAGttcctgatcctgcaggagcagaAGATCATCCCAGAGGACATGGCGGTCACAGACATGAAGGAGTGGCTGTTGGAAAAGGACAGTAGCTCATTCTGGCAGCAGGACAAGGCTTGCAGACACAGGACCGGGGCAGACCGGCCAGGCCGGAGCAGCGCTGAGCGGAAAACCTCAGTGAAGCCAGACATGCTGGAGAAGCTGCGTGAGGCCGCTCGCAGGATTGCCAGGAACAGAAAGGTTTCCCCAGCTGCTGAGGAAGACATGCAGAGTGCCTGAGTCCTGCTGCATCTAACTGCACACAGCCAGGGCCTGGAGTCCTGTCAAAGTGGTGTAGCAACAGCAAATGAGACAGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016212 True 1501 mRNA 0.56 11 12360575 12376528

Neighbor

gene id symbol gene type direction distance location
AMCG00016209 NA coding downstream 39919 12296853 ~ 12320656 (-)
AMCG00016210 LOC106567911,LOC102798362,LOC104951736,LOC105923239,LOC107101883 coding downstream 64515 12264274 ~ 12296060 (-)
AMCG00016208 sacs,LOC106612984 coding downstream 124053 12208148 ~ 12236522 (-)
AMCG00016204 LOC104943497 coding downstream 416923 11906076 ~ 11943652 (-)
AMCG00016200 NA coding downstream 474382 11868787 ~ 11886193 (-)
AMCG00016217 dscam,LOC106612992 coding upstream 96735 12473263 ~ 12499001 (-)
AMCG00016216 dscam,LOC105030490 coding upstream 137830 12514358 ~ 12531045 (-)
AMCG00016219 LOC106612992,LOC106581126 coding upstream 226356 12602884 ~ 12607201 (-)
AMCG00016227 NA coding upstream 351586 12728114 ~ 12734030 (-)
AMCG00016223 NA coding upstream 362223 12738751 ~ 12743780 (-)
G12046 NA non-coding downstream 5211 12354675 ~ 12355364 (-)
G12041 NA non-coding downstream 7194 12353160 ~ 12353381 (-)
G11996 NA non-coding downstream 121561 12238785 ~ 12239014 (-)
G11865 NA non-coding downstream 621976 11738345 ~ 11738599 (-)
G11858 LOC106904821 non-coding downstream 643158 11701591 ~ 11717417 (-)
G12058 NA non-coding upstream 11270 12387798 ~ 12391408 (-)
G12096 NA non-coding upstream 261965 12638493 ~ 12638698 (-)
G12235 NA non-coding upstream 721463 13097991 ~ 13100224 (-)
G12359 NA non-coding upstream 1250727 13627255 ~ 13639150 (-)
G12358 NA non-coding upstream 1261775 13638303 ~ 13639590 (-)
AMCG00016211 NA other downstream 31542 12323161 ~ 12329033 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other downstream 413253 11832428 ~ 11947322 (-)
AMCG00016194 NA other downstream 579028 11766152 ~ 11781547 (-)
AMCG00016176 NA other downstream 1512764 10834412 ~ 10847811 (-)
AMCG00016134 NA other downstream 3532815 8823545 ~ 8827760 (-)
AMCG00016226 NA other upstream 473350 12849878 ~ 12870560 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other upstream 1166820 13543348 ~ 13559184 (-)
AMCG00016281 NA other upstream 2043828 14420356 ~ 14427290 (-)
AMCG00016293 NA other upstream 2408670 14785198 ~ 14791969 (-)
AMCG00016327 NA other upstream 4094083 16470611 ~ 16475170 (-)

Expression


Co-expression Network