Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016214 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 12400829 ~ 12407292 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K06786 | JAM4, JCAM; junctional adhesion molecule 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016214 | True | 627 | mRNA | 0.51 | 3 | 12400829 | 12407292 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016215 | NA | coding | upstream | 3776 | 12385978 ~ 12397053 (+) |
| AMCG00016207 | NA | coding | upstream | 139687 | 12241643 ~ 12261142 (+) |
| AMCG00016206 | NA | coding | upstream | 195170 | 12173068 ~ 12205659 (+) |
| AMCG00016205 | NA | coding | upstream | 291445 | 12056700 ~ 12109384 (+) |
| AMCG00016197 | pcyt1b,LOC107590340,LOC107721854 | coding | upstream | 552965 | 11837672 ~ 11847864 (+) |
| AMCG00016218 | NA | coding | downstream | 258891 | 12666183 ~ 12679044 (+) |
| AMCG00016220 | NA | coding | downstream | 274980 | 12682272 ~ 12691799 (+) |
| AMCG00016229 | NA | coding | downstream | 478334 | 12885626 ~ 12890771 (+) |
| AMCG00016230 | NA | coding | downstream | 552756 | 12960048 ~ 12973547 (+) |
| AMCG00016237 | NA | coding | downstream | 613691 | 13020983 ~ 13021201 (+) |
| G12043 | NA | non-coding | upstream | 25720 | 12374748 ~ 12375109 (+) |
| G12042 | NA | non-coding | upstream | 45460 | 12354675 ~ 12355369 (+) |
| G12036 | NA | non-coding | upstream | 67717 | 12332136 ~ 12333112 (+) |
| G12032 | NA | non-coding | upstream | 72436 | 12323177 ~ 12328393 (+) |
| G12009 | NA | non-coding | upstream | 135120 | 12262051 ~ 12265709 (+) |
| G12183 | NA | non-coding | downstream | 496060 | 12903352 ~ 12903574 (+) |
| G12209 | serpinh1b,LOC106613072,LOC107666206,LOC107588392,LOC107756564,LOC106581278 | non-coding | downstream | 570986 | 12978278 ~ 12979516 (+) |
| G12214 | NA | non-coding | downstream | 634950 | 13042242 ~ 13100583 (+) |
| G12217 | NA | non-coding | downstream | 657927 | 13065219 ~ 13065938 (+) |
| G12220 | NA | non-coding | downstream | 664279 | 13071571 ~ 13073752 (+) |
| AMCG00016202 | NA | other | upstream | 394877 | 11992972 ~ 12005952 (+) |
| G11921 | NA | other | upstream | 529094 | 11868825 ~ 11871735 (+) |
| AMCG00016174 | NA | other | upstream | 1442797 | 10844127 ~ 10958032 (+) |
| G11660 | NA | other | upstream | 2801673 | 9598815 ~ 9599156 (+) |
| AMCG00016159 | ubl3,LOC107578048,LOC106604009 | other | upstream | 2809180 | 9559464 ~ 9591649 (+) |
| AMCG00016213 | NA | other | downstream | 27844 | 12435136 ~ 12461265 (+) |
| AMCG00016221 | NA | other | downstream | 370932 | 12778224 ~ 12786899 (+) |
| AMCG00016241 | NA | other | downstream | 864292 | 13271584 ~ 13389636 (+) |
| G12348 | NA | other | downstream | 1214587 | 13621879 ~ 13627711 (+) |
| G12349 | NA | other | downstream | 1223993 | 13631285 ~ 13631797 (+) |
