AMCG00016215


Basic Information

Item Value
gene id AMCG00016215
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 12385978 ~ 12397053 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016215
TTAAATGAGCAGCGTGGGGCGGCGGATGGTCACAATAAAGTGATCCGCTGTGCTGCCAGTCTCTGGGGGAGACGGCCTGTTGCGTTAGACCTCATTCTCCAGCTTCCACTGTAGCAAACATGGTCATCAAAGTCTTCTTAGCTACTTCATCGGGGTCCACTGCGATCAAGAAGAAGCAACAGGAGGTGGTGGGGTTCTTGGAGGCCAATAAGATTGACTATGCGCAGATGGACATTGCCTCCAACGAGGAGAACAGAATGTGGATGAGGGAAAATGACTATGAGACGTTCTTTGATGCCAAGGAAGATAATCGAGTTTTTGCATTCCTGGGTCTGGCACCTCCCCCAGGGTCAAAGGAAGCAAAGATGGCAGAACAGGCTCTAATTCTCCAGAATGGGAAAGATCCAGAGGAACACCTTGAAACACCAGCTGAGGAGTGTAATGGTGAAAGTCCCACAGAGGCAGAAGACGGCGAGCAGGAGAGTGAAAAGCAAGAGGCCGCAGAGGAAGTGGAGCAGACCtCAAATGCAGATGACGATCAGGAAGATCAAGAAAACAAGGAGGATGACGATGAACTGCCAGTCAGTGAGGAAGAAGAGGACCAGCCTGTCACTGAGGATGAAGAGGATGCCCCTGTCACAGAGGTAGACTCCTCCTTCACACTCAGTCCAGTGCATGGTTTTGGTCAATGGGGTTGGAAATTGGAGTGgaggaagaggaagaggaagacgaGGAAAAAGAAGATGACCTTGAAGCAGAGGATGAAGCAGAAGATGAATCTTAATGTAATGGAGGTCAGGGCTTCTGTCTGCCTTCACAgttcagCTGGCAGAGGCCCTTTCAGCTCAGATTCAACTCCCTCGCTCCTCCACTTAAAACACACCAGCACCAGTCTTCAGGAAACAACGGCCTTCACCTGGACATGGAACAGTCTGCCTGTCCACTTTTCGTCCGCTTCAAGAAAACCCTTTCCCCACATTAATGGATTTTGAATATTATCTGTGTGGGGAAGTACACTTAATAGATGCCTTAATTGTGTAGCTGCTTACAGCATTATCAAAGCACTTACACTGTACCTAGTAATTGTAATGTCAGAACAGGGGCGTATCTTATTGTACAGAGTTCTATACAGGTTTTCGTGTGCACCAAACTAGATAAAACTAGTTTTTGCCATTATGTGTTTTGTGCAACCTGACACCCACTCTGTATTTTTGCTAAGTATGTTCCCCCCGAATGCAGTTCACTGCCATCAATCGCACCAGGAAGTAACACCGGCACTAAAACAATTTCTTCTTGATGTCATTACAACTCACTGGGGTAAGTTTGCACTAGTTTGACAGTTCCACTCCTCCGAGGGTGGAAAATTGTAGAGCTCGAACTGAAGAAACGCAGAATAGCTCCACAGTATTTGgacatttctttcaaatatttGGCTTGATTACAAGAGACTCACTGGGTTTGTGCCTCCGTCCTTCACCAAATTAAGCCATCCCTACTTTCCCATGGAGTGCCACTGTGTGTGTCTAATTACCACTCCCTAATGGAGGTTGTCActttaaattatgcatattttgGTCAGATGCAGAATGGTAcacaaaaaatgataattttcaGATCtactataaatgtataaaatgttaataaactTTTGTGTCTGAAAATACAGCTTCAGAGGAACATTTTTATTCCCGCCCCCCTCTCATCACCCTTCCAAAAAACAAGTGCAAGGGTTTTAGTAATATATTTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016215 True 1749 mRNA 0.45 12 12385978 12397053

Neighbor

gene id symbol gene type direction distance location
AMCG00016207 NA coding upstream 124836 12241643 ~ 12261142 (+)
AMCG00016206 NA coding upstream 180319 12173068 ~ 12205659 (+)
AMCG00016205 NA coding upstream 276594 12056700 ~ 12109384 (+)
AMCG00016197 pcyt1b,LOC107590340,LOC107721854 coding upstream 538114 11837672 ~ 11847864 (+)
AMCG00016196 NA coding upstream 585182 11796688 ~ 11800796 (+)
AMCG00016214 NA coding downstream 3776 12400829 ~ 12407292 (+)
AMCG00016218 NA coding downstream 269130 12666183 ~ 12679044 (+)
AMCG00016220 NA coding downstream 285219 12682272 ~ 12691799 (+)
AMCG00016229 NA coding downstream 488573 12885626 ~ 12890771 (+)
AMCG00016230 NA coding downstream 562995 12960048 ~ 12973547 (+)
G12043 NA non-coding upstream 10869 12374748 ~ 12375109 (+)
G12042 NA non-coding upstream 30609 12354675 ~ 12355369 (+)
G12036 NA non-coding upstream 52866 12332136 ~ 12333112 (+)
G12032 NA non-coding upstream 57585 12323177 ~ 12328393 (+)
G12009 NA non-coding upstream 120269 12262051 ~ 12265709 (+)
G12183 NA non-coding downstream 506299 12903352 ~ 12903574 (+)
G12209 serpinh1b,LOC106613072,LOC107666206,LOC107588392,LOC107756564,LOC106581278 non-coding downstream 581225 12978278 ~ 12979516 (+)
G12214 NA non-coding downstream 645189 13042242 ~ 13100583 (+)
G12217 NA non-coding downstream 668166 13065219 ~ 13065938 (+)
G12220 NA non-coding downstream 674518 13071571 ~ 13073752 (+)
AMCG00016202 NA other upstream 380026 11992972 ~ 12005952 (+)
G11921 NA other upstream 514243 11868825 ~ 11871735 (+)
AMCG00016174 NA other upstream 1427946 10844127 ~ 10958032 (+)
G11660 NA other upstream 2786822 9598815 ~ 9599156 (+)
AMCG00016159 ubl3,LOC107578048,LOC106604009 other upstream 2794329 9559464 ~ 9591649 (+)
AMCG00016213 NA other downstream 38083 12435136 ~ 12461265 (+)
AMCG00016221 NA other downstream 381171 12778224 ~ 12786899 (+)
AMCG00016241 NA other downstream 874531 13271584 ~ 13389636 (+)
G12348 NA other downstream 1224826 13621879 ~ 13627711 (+)
G12349 NA other downstream 1234232 13631285 ~ 13631797 (+)

Expression


Co-expression Network