AMCG00016231


Basic Information

Item Value
gene id AMCG00016231
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 13037182 ~ 13063508 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016231
ATGTGTCTGCAGCTTTCAGAAGTGGTGCCAGCTTCCTGGACGCCTCGATGTAATCCCAGCTGGTGTCTGTTGTCTTTGCAGTGGGAGCGCATGTGGTTTCTCATCCTCTCCTGCACCTTCTTCCTGCTCctgatttggttttatttctggTGGGAGGCTCACAATGATTACAATGAGTTTAACTGGGTTGGAGACGAGGAGGGGAAGTCTAGGGAAattTTAGCACTATGTCATGTAGCTGTGGGACAGCAGCTAAACCTACACTGGCTCCACAAGATCGGGGTGACGGCCGTGCTGGTGACCACCATGATAGCGGTGATTTCGGTGGAGCAGCTCTGGGGCGAAGAGTGGGGTATCATTTGGATCTCCCTCCAGGCGACCGGCCCTTTCCTGCACATAGGGGCTGTAGCTGCCATTACGATGCTAGCCTGGCTGGTCGCTGGGCAATTTGCCCGTGCAGAGAAATCAATGTTTCAGGCAGTGCTGCTCCTGGCCTACCTGAGTGTCCTGCTGGGACTCTACCTGGTGCCCCTCACCATCACCTCACCCTGCTTCATGGAGAGGAGCCGTCTCAAGCACCGGCCCGATGTCATTGGCCATCAGGGAGCTCCTATGCTTGCTCCCGAAAACACCCTGATGTCATTCCGTAAGGCGTTGCAGCAGAACATCGGTGGACTGGAAGTTGACGTGACCATCAGCCTGGACGGCGTGCCCTTCCTCATGCGAGACCACACCCTGAGGCGGACCACGGATGTGCAGAAGGTCTTTCCCGAGAGGCAGCATGAGGACGCCTCCATGTTCAACTGGACCGACCTCCAGGCCCTCAACTCAGGACAGTGGTTTATTCAGGACGACCCTTTCTGGACGGCACAGTCCCTCTCTGCAAAAGACTACACTCAGGCAGCGAACCAGTCCATCTGCACCCTGAGGGAGCTGCTGCAGCTGGCTGCACGAAACAACAAATCGGTCATCTTCAACCTGCGCCGACCACCTGCCGGGCACCCCTACTACGAGAGCTGGATCAATGTCACCTTGGACACAGTCCGGCAGTCTGGCATACCAGAGGAGCTGGTGATGTGGACCCCAGACTCGGACAGACAGATGGTGAAGAAAATCGCTCCTGGCTTCCAGCAGACCTCGGGGGTGAAGGAGTCCGTGGAGACACTGCGGAGGAAAGGCATCGTCAAACTCAACCTGCGATACAACCAGGCCAGCGCTCAGGAAATCAGGGAGTTCACGGCCAGCAATATCAGCGTCAATCTGTTCAGTGTGAATGATCCCTGGCTCTTCTCTGTGCTGTGGTGCAGTGGGGTGCCTTCTGTCTCCTCAGATGCCCCCCAGATCCTCAAAAAGGTGCCTTATCCCATCTGGCTCATGACTCCAGATGAATACTACCTGATCTGGATAACGACGGATCTTGTTTCTTTTACTATAATAATAGGAATTTTTGTACTCCAAAAGTATCGTCTGGGCAGCATACGCAGCTACAACCCTGAGCAGATAATGCTGAGTGCGGCCGTCAGGAGGTCCAGCCAGGATGTGAAGATCATGAAGGAGAAACTCATCTTTTCAGAAATAAACAACGGCGTGAGCAGCTCGGAGGAGCTCTCGCTGTGCGGGGAGAACGGCTATGATGGGTACACCAACGAAGCCATCACCCCCGTCGACCAGCACGCTCTGAAGATGCGTATTAACTGAGTGGAGACCGCAACACAGAAATCCCTTttacaagaacaagaaaaaacattttaacattttttgtttgtttgttttaacatggTGTTCAGATCACTAAGAAATGGGATAAAAAAAATTTGTTCTCGCTGAGCTACTGACTGACTGTGACACCACGGGAACATTGTTTCCACCCCACTgctttgtacatttgtaaatactGTTCCCTTTTTATTGTTCTTGCGTGAGGTAGAGTTAATTATTAAGATTTGTAAACTACAAGCACTTTTCACAGAAAACTGACAAAATCGGTAACCTACTCTCCTCCGTCTGTGTTTGCCGACGAGCCGGACACGTCTCCTGTGTGACTCTTGTGACCTTCAGTGCGGTGGCTTTCACTCCGGCCAATGGCTTGGTAGAAGACATGGCCACCTTATGGATCgttattactttttttgtctCCTATCCCCATGACAGTGCGAGAATAAGTATACAACCCATATGGCTTAGATTTTAGAAAACCCccctttctttattattatttttttacctggAAAGAATTGTCCTTTCAAATTTTACCTTTGCATACTTCTTGTGCTGTAATGTTGGACATACAGCTCCAGATCCTTATTGGTATGATATTCAGTTTGTGATTAATGAGTCTTTTCATCAAAGTGCAATTTAGCccatactgtacatacagagAATGATGTGTGAAGACTGTAGCAAAAAGCACTGGAGCACTTCatagaaactgaaaacagtttGTAAGACTCAGTGTTAATAGTTCATCTTGTTCCcgtgcacaaaaataaaaataagtaaaccaTGGACGTTGCACTTTGGTGCAGAGATTCTGCAAAATCTGCCTCAATGAACATCATTGTCTTCTTCGTGGTAATGTGAAGTGATATCATATGAGACTCTTTTGTTCTTCTTGGAGTTTTACTTCTAGTTTATAGTGTGTATGGTTCTAAGAGCCCTGTGTGCCTGATTTGATGTAGCATGCTACAGAAGAGATGGTTTAACCTGCATAAATAGTCGAGAAAATCAGAATCTCTAGGGAAACAACGGTGATGTATTCATGATATCTGACAATCAGTTCTCTACATCGTTATTAGACTCTTCAGTGtgattgcattttcaaagtGAGCAAGACTTCTGATGTGTTTCAGGGTTTGCTTTTTGATGAGGTCACATTCGACATCCAGGAAGTGAAGTGAAGGTAAAGATTAtggcatttaattaaaaggggAATGCAACCTCAACAACTGAATTGCCAAAGAAGTCTGAAAATCAAAAGTACTTGTTAGACCTTCTAAGAAACCAACACTGCGATAGATGTAGGGTATTTAACTGAACTTTGTTGCGTAAGCCATCTAGTGGAACAAAACCGAGTTCAATAAAGGTATCAAAGTAATTCTACTCattgttgctttatttattttttaatttgttgtcagGAAAAAAGCAATGACACTTTTGCCACCAAAGGgattttctttgttgtattttacaggTATGGTTAATATTAGATGATTTACGATGCCCAGCAAAAGCCTGAAAGCCTTTGTAGAGCATAGTGGCGGCCCCTCCACACTTTCCTGCACATCTACCAAACAAATCGGAGCGtcatgtttgaaatgtttttaaatccacCATAGTTCATGTGGTTTCTTTATTTGAAGGCATAGAGCTTTGTCATCTGCTGTAACTGCTAGTTTCCattactgtgtttttgtgttgtggttttaaAACCCTGCCAGGGAAACATTCCCATTTTAgattttatacagtttatacagtaTTCGGCCAGCTTTACCAGTCCTCCATCCCCCTCTTTGGAGTTCTGAAAACCTGCATTTAATGACGTTGTCTACTCACACATGACCTCGGTTTCCTTCAGCGCTGCTTTAGGAATGTAATCCATACCTTTCCAGTTGAGCTGTTGAAGTTATGGATTCGTGTACAGATCTTGGCCAGGGATGGTTTGTATCCTATTTCCATGTGCTTGACTTTGCATTAAAAGCTTTCAGACTCTTGTATTGCTGAGGGTGTGTGGAGATTAACAAGTCTTCACTGTTCttgtacaatataatatatggtGTGCTTGTGGTTCGTATTTTGGAGCTGAGTAACAATGTGCTGGCAACATTACAAGATAGTGTACAGGAATTgggtatttattattattattttttttatcattttaatacatttccctGCATTTCAGGCTATATAAGAAACTacatgtttgcctgtatagCCTGAAATatagtgtctctgtgtgtgtatataggtataataaaattaataaattatgctCCACTTACCTGGAGCCACATCTAGACACTAGCagtgtaattaattttaatgaaagggAAATGTTGACcatggattttaaatgtaaaggagattacaaatgtatgtgttgGGAGTCCGGTTTCTTCGTTTTTGAGTCAGGGTAGACAAAAAATagattcctttttattttcttccaatttGGCATTATCTGAATTAAACGGGTCAATACACAATTATTTCTATAATTTACTGGGGGTTCTGGGTTGAGTTGGTTTCTTAATTTGTCCAGCACACGAAGTGTAAATATACCTTGCCAGGTGCTAGTGGGGAGGCATGGGAACATTGTAGCTGTATTTGCACTCTGAACAAGAAACACGGTTTAATCTTAACGAGTGTCCTCTGTTAAGTGTGATTTACATATTGACTCATAGTTTCCAGCTGAGATGAAGGTCATCTGAGCTAATGCTGAACTATTCTTGTTACTGCCAAGAGTtatgaacattaaaaaagctGAACAGAAAATGCTTGTTGTCCTTCAGCACCTGCAGAAGTAACTTGCCAATTTACATAGTGACAGACGGCAACTTTCAGATCAAGGAATTTGCCACTTTATTGGTTCATCTTCAACATTAATGCCAGATAACCGGAGATATGGATTAATCATGAGTACAAATCACTACATAAACCAGTATTTCACTCTGTATAGACTTGAGATTCTTGTGTCCGTCAGTATGAATTTGTAGCCCTGACTGGCTGGCTGTTTGCATGAAGCCAGGACTCTCAGAGCAGGTGCAGTTAGATTCGGTGAGATCCGGCTGAATAATTGAGTGGAAAAGCctaaaaacaatatgaataaatcaatgttgAACAAGTATCTATTCTCTTAAATGGGTGttatttgtattcagtatttcCCTAACTTTCAGAACTTTTTCACAgtgcagttttatatttatatattttcttttttgttatgtGAATGCTTTTTTGTGATATCAATGTGTGcaataaattattttccaatttgAGTTTTGAAACTTTACTCTAGCATCTAGTACTTCATGGCTTTAAGGATGGTGGATATCAGTGTTTTTGATCTGGCCACCTGACAGACACACTAACTACTGTGGGGAGGGCCCAGATGTTGGCCACTGCCTACAGCACCGGTGAATTAAATCCTCGAACAATTTGCTAAGGTTTCAGGACCAAACCAGATCATATAGTGCAAGAAAGGGAAGTGaatgtatttgtacatttggtgtccatcaattaaaccttttatttctgaaatgagTAAATTATTTGCTAGGAAAGTAACTTTATCTCATCTCTATGCACATTCAAAGTTTGTTCCTAGATTTGCCAAAAACTAGACTGTGAGGATAAGTCTTCACAGAGCAGGTAAAagtaatgaatacaaaaatataaccgCCAAACTGgtacaaaaaagaaatctgGTTTAATATTGACTTTCATGAAAAAGTAGTACAGCTGTCAAACCTTACAGTTCATTTACAGGCATTGTGGAATTGAATGTTCAGTTAATTGACCTACAAAGCTTTTTGCaatcaaaacaacacaattgtacttctcaaagaaaaaatatattatctcctCTTCATATATTATTCTCTATGTAATATTGAATTTTTCATTGCACTAGAGATACAGTACTTCATACTGGCTGAACAGTATTTTGAGCACATTGGGGAATGTTACCTCCTGTCCCTTTTACTGTGCAGTTATGCACATCAGAGTTTATTAACAACACCCTTGACAATCGGACTCTTTGAATCTGACCCTTTTCATTTGAGTCTTTAGCCTTCAGGTTTCTCTACACTTGGCTGGAATGTCTTTtgataaatggaaaatgtcgTCACAATGCAGCCAAAGTGAGACACTAATTGCCACTGAAATTCACTAAATTTGATCCCATCTGTACAGAGGAACCTGGATATCTTTTCTCCAGCTGCCAAATTCAGTTTTTCACCTTCGAGAACTTTCAGTGTTGCCTTTGGaggaaatatttcatatttatacatGATAGTACATTGGagagaaactaaaatgtaaaataaatagttctgCATTTTGCAGAGAATCCTGGtccataaatacattcacattcCCTCAAAATCATGTAAACTCTGTTTTGATCTCGGTGGTGGTAAAGCCACCACTTTTTataccaagaaaataaaattaaaactctgtcacaaacaaaaaagtgaaattatcCACGTATTGTTTAAACTGACTGCAGAATTTCCAATGTGGCCCCTATAGCCAGTTTACACTATACAATTTGCTTCAATACAGGatcatttcccttttttgtgtttttcaatccTCTCTCCGGTGACCGTGTTATACTATAAGGTATTCTATTCTTAAACACAGGATTAATTCATTTGCTGCAAAGTACACAGACAAGTTTCTGTTTAACCCTTTCAAAGgtcaacattcattttaaatcatgaacGCAAAATGTGCCCAGTGCAATTTGTAAAGCATCACAAGTACCAAGATGGTCAAGCAGTTCACTTTTCAGGAAAGGCACAACTAAATGTATGAGGAGCAGGGGAAGAAATGACACCCACATTTAAAAGACACCTCTTAAAATGTCTCAGTTTCCTGCAGGcaattaaatagtttttgtcCCTCGctcaacaccaccaccaactcGTCCAAAGTAGCAATTCAAAGTGTTTTAGCAGGTGTCTGTAAATTGTATGAAACATCTTGACTTCATTTCGGTCTCCTCTTCCTGAGCAGTTTCCTAATCTATACCTTGGACAGATTAGTTCCTCAAACCCTTAACCATAaagcaatagttatttttatttagaatcAAAACTAGCTGGGTTTCAGTTGTTATTGACCATCTGGCAGAATGTTTCAGTAAACATTACAGCtgagcttgttttttttgttgttttcttttagtcAATCAACCATTTGTTCCTCTGATATTCGCTGTAAATAAGGAGGACTTTTCTTCTCCCCGATGAGGACTTAACTAAAAACGGGAACACAAGCATTCAAAATTGCAGGTCTGTTAATGAAACACACTGTGCGCCAAGGGAGCAGTGGGAGTGAATGTGAAAATGCAACGCCATTCAGATCAGTCTCTGACATATGTTCTGAACACTTCGAGACTGAGATGGACAGAAAGTGTAGATATGATCCTTAGGCTAGTCTGGCAagaagaatgttttttgttgttggttgatttttcccatttttaatgaaaaaataaatgttacacaaaataacaccattgttttttaattaggaaTCAATCGAAGTTCGTCTTCTGTAAGTGCCTGTTGGGAATCTCGATAGCGCTGACCTGCAAAGGCCAGGAGCCACCCATGATCCCTGCCTGGATGGCCACGCCAGTCACCACCGCCAGATCCGGGTCCACGGAGGTGTTTGGGTCCTTCCCGAAATACTCGCTGATGATCTGGCGAATGCGGGGGATCCTCGTTGATCCGCCAACCAACACGATCTCGTCCACCTCCGCCTTGGCCAGCTGGCCCTCCCTCAGCACCTCCTCGATTGGAATGAGGATTTTCTGGAAGAGGTCGGCGTTCAGCTCCTCGAACAGCTCTCTGGTGATCACCTCCTGGAACTGCACGCCCTGGGGCTCCCCCTGGGGCCCCCGCGGCTCCAGGCTCAGGGCAGTGCTGAACAAGTAGCTGGGCTGGAGGGTCAGATTGAGCTTGGCCTGCTCCACGGCCTGCCGCAGACGGTGGATGTCTTCCTTGCGCGAGGGAAGGACCCCGTACTGCTGTTGGACTCGCTCCAATATGTGCTGCAGAAGCCGCTGGTTGAAGTCCTGGCCCCCCAGCTTATTATTCCCTGAGCCATGGCCCTGGTTAGAAACATGCCTCCCCGTTTGTTCAATAAGGAGACATCCAAGGTTCCTCCCCCCAGGTCGACCACCAGCACATTGAAGACGTCCGCCTTGTGCAGCCCATAGGCCATAGCTGCTGCCGTCGGCTCATTGATCACCCGCAGGATGTCCAGACCTGCCAGATTGGCTGCCCTGATTGTGTAGTTTCTTTGTCTCTCGTCGAACTCCGCCGGCACAGAGATGACGGCCTTGGAGATAGGCACTCCCAGGTGCCTCTCTGCCATCTTCCTCATTTTCAGGAGGAGGCGGGAGCCAATGAACTCCGGGCTGACAGTGAACGTCCGATTGGTCGTTATTGAAAACTCTGCACTCCCGTTGTCATATACAACCTTAAACTGGTATCTGGCACTTTCCTGAGCCAACTCTTCGGGTTTAAAAAGCTTCCCTATGAATCTTTTGGCATCGTAGATGGTGTTGTAAGGATTGGCGTCGGCCAGTTCCTGTCCATCATAGCCCACGTTGATGTCAGAGGCAGTGAAGGACACCACACTTGGGAGGCTCTTCCTCCCGTCCTCATCACCAATCACCTCCACATCCCCCACGCCGGGATGGAAGACCCCCACAGAGCAGAAGGTGGTGCCCAGGTCCAGACCGATGACTTTGGGCTTAGGGTGAGGCAAGTACTGTTGACCCAAATAACCAGCCAGCAAAAGAGCTAGGACAGCCGAGCCTAGTATGGACATTTCCCCGGCCATCCTCTCCAATACACTTCTGAATATCCAAACCCGTTTAAGAAAAGCCCCTACACTTGCGTTACCGGGTTGATTTCTAAAGCGATGACTGTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016231 True 8684 mRNA 0.44 19 13037182 13063508

Neighbor

gene id symbol gene type direction distance location
AMCG00016237 NA coding upstream 15981 13020983 ~ 13021201 (+)
AMCG00016230 NA coding upstream 63635 12960048 ~ 12973547 (+)
AMCG00016229 NA coding upstream 146411 12885626 ~ 12890771 (+)
AMCG00016220 NA coding upstream 345383 12682272 ~ 12691799 (+)
AMCG00016218 NA coding upstream 358138 12666183 ~ 12679044 (+)
AMCG00016240 NA coding downstream 121526 13185034 ~ 13188393 (+)
AMCG00016239 usp25,LOC107653727 coding downstream 148550 13212058 ~ 13247016 (+)
AMCG00016242 NA coding downstream 381530 13445038 ~ 13455916 (+)
AMCG00016249 atg101,LOC107751375,LOC107686213,LOC107589731 coding downstream 519536 13583044 ~ 13588973 (+)
AMCG00016250 NA coding downstream 534326 13597834 ~ 13617644 (+)
G12209 serpinh1b,LOC106613072,LOC107666206,LOC107588392,LOC107756564,LOC106581278 non-coding upstream 57666 12978278 ~ 12979516 (+)
G12183 NA non-coding upstream 133608 12903352 ~ 12903574 (+)
G12043 NA non-coding upstream 662073 12374748 ~ 12375109 (+)
G12042 NA non-coding upstream 681813 12354675 ~ 12355369 (+)
G12036 NA non-coding upstream 704070 12332136 ~ 12333112 (+)
G12217 NA non-coding downstream 1711 13065219 ~ 13065938 (+)
G12220 NA non-coding downstream 8063 13071571 ~ 13073752 (+)
G12289 NA non-coding downstream 409980 13473488 ~ 13473785 (+)
G12330 NA non-coding downstream 482891 13546399 ~ 13546598 (+)
G12331 NA non-coding downstream 488086 13551594 ~ 13551858 (+)
AMCG00016221 NA other upstream 250283 12778224 ~ 12786899 (+)
AMCG00016213 NA other upstream 575917 12435136 ~ 12461265 (+)
AMCG00016202 NA other upstream 1031230 11992972 ~ 12005952 (+)
G11921 NA other upstream 1165447 11868825 ~ 11871735 (+)
AMCG00016174 NA other upstream 2079150 10844127 ~ 10958032 (+)
AMCG00016241 NA other downstream 208076 13271584 ~ 13389636 (+)
G12348 NA other downstream 558371 13621879 ~ 13627711 (+)
G12349 NA other downstream 567777 13631285 ~ 13631797 (+)
G12351 NA other downstream 571934 13635442 ~ 13637001 (+)
G12587 NA other downstream 1374263 14437771 ~ 14438606 (+)

Expression


Co-expression Network