AMCG00016243


Basic Information

Item Value
gene id AMCG00016243
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 13467358 ~ 13477045 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016243
ATGCTTTCGCTGGGCAACCCCGGTGACGTCACGATTCTCGGCAGCCATGGGGAGTCCGGCGCGCGCAGAGCCCGAGAGCACGAGCTGGAGCAGCGCGCGGAGCAGCTGATATGGAAGGTGGcgaagctggagaagaaaaagGTGGAGGAGTTCTCGGAGCGACTGACGGCAGTGTTGCAGGAGAAGTTCAGAGAACACTGGTATCCTGACAACCCTGTCAAGGGCCAGGCCTACAGGTGTATCCGTGTGAACAGGCTGCAGAGGGAGGACCCCGAGCTGCGCCGCGCCTGCGAGGAGAGCAGGGTGCTGTACTGCGACCTGGGCCTGCCGTGGGAGCTCACCCTGTGGGTCGACCCTGGGGAGGTGTGCTGCAGGTATGGTGAGAAGAACCATGCTTTTACGGTGGCGAGTTTTCCCAGCAGCAGCGATGCCGACGATAAAGAGGACATATCTAAGAAAGTGACGAGCGCTGTGGAGAAGGTGACCTCCGACTACCACTCCGGCTCTTCCTCAGATGAAGAGACGCCTCGAGACACCCAGCACACCCACCCCTGCCCCCCGTTTCGCCCGGTGTTCCAGGTGCCCGAGTTCATGTACCAGCCTGTTCCAGCGTGGCAGCAGCTGCCCAGGAAGAAGTGTGTTCTGTACAGAGGGCAGGGCTTCCCACAGCCACAGTACAGGTACCATCCCCAACCGAGGCAAGGCCGGGCGTTTCACCAGGGGCAGTGGGCGCCGCCGGGGCCTCGGAGAGGACAGGGCTACTGGGGCATGGCGCAGGTTCTGGGCCACTGTTAGTAACCAGGGCAGAGATGTACCACTGTAGGCAATGTAGTTTATGGACAGGGAGGACAACAACACAACCCCATGAGACTTCGGACCAAACTCTATACAAGTATTTTTgtagtaatgtgtttttttatattaaaactcTTTGCACTTTAGATAAGATGTAATAGTATAatatttaagtgtgtgtgtgtctgtgtgtgtatcatacatagaggagaaaaaacactgtttaaaagacctgaatattttttaaatactggaagtatgtactgtatttatgtaatattcATAGGAATCAGTATTAATCACAGAAGGTTGACCTGTTTGTCCATCAGCTTGTTTACATGaccaaatgtttgtatttatttacattataatcTGATAGTTTGTACATCTTGTATAGACCTTAAATTATGGCAGCTTTAATTCTTgcagcaattaaataaatttgcT

Function

GO: NA

KEGG:

id description
K14443 TOB; protein Tob/BTG

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016243 True 1242 mRNA 0.51 5 13467358 13477045

Neighbor

gene id symbol gene type direction distance location
AMCG00016238 NA coding downstream 395716 13065216 ~ 13071642 (-)
AMCG00016234 stch,hspa13,LOC106613070 coding downstream 404593 13060741 ~ 13062765 (-)
AMCG00016233 serpinh1b,LOC107588392,LOC107666206,LOC107756564,LOC107743426 coding downstream 484062 12978276 ~ 12983296 (-)
AMCG00016235 NA coding downstream 517778 12940122 ~ 12949580 (-)
AMCG00016232 NA coding downstream 535061 12906907 ~ 12932297 (-)
AMCG00016248 NA coding upstream 7292 13484337 ~ 13494574 (-)
AMCG00016244 NA coding upstream 45129 13522174 ~ 13534975 (-)
AMCG00016247 zgc:112083,LOC108278169,LOC107726099,LOC107662779 coding upstream 58649 13535694 ~ 13542635 (-)
AMCG00016245 NA coding upstream 85126 13562171 ~ 13582666 (-)
AMCG00016251 NA coding upstream 107862 13584907 ~ 13595151 (-)
G12235 NA non-coding downstream 367134 13097991 ~ 13100224 (-)
G12096 NA non-coding downstream 828660 12638493 ~ 12638698 (-)
G12058 NA non-coding downstream 1075950 12387798 ~ 12391408 (-)
G12046 NA non-coding downstream 1111994 12354675 ~ 12355364 (-)
G12041 NA non-coding downstream 1113977 12353160 ~ 12353381 (-)
G12359 NA non-coding upstream 150210 13627255 ~ 13639150 (-)
G12358 NA non-coding upstream 161258 13638303 ~ 13639590 (-)
G12373 NA non-coding upstream 180398 13657443 ~ 13659659 (-)
G12585 NA non-coding upstream 950580 14427625 ~ 14428817 (-)
G12594 NA non-coding upstream 954567 14431612 ~ 14436531 (-)
AMCG00016226 NA other downstream 596798 12849878 ~ 12870560 (-)
AMCG00016211 NA other downstream 1138325 12323161 ~ 12329033 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other downstream 1520036 11832428 ~ 11947322 (-)
AMCG00016194 NA other downstream 1685811 11766152 ~ 11781547 (-)
AMCG00016176 NA other downstream 2619547 10834412 ~ 10847811 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other upstream 66303 13543348 ~ 13559184 (-)
AMCG00016281 NA other upstream 943311 14420356 ~ 14427290 (-)
AMCG00016293 NA other upstream 1308153 14785198 ~ 14791969 (-)
AMCG00016327 NA other upstream 2993566 16470611 ~ 16475170 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 3381496 16858541 ~ 16861179 (-)

Expression


Co-expression Network