AMCG00016250


Basic Information

Item Value
gene id AMCG00016250
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 13597834 ~ 13617644 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016250
ACTCTGGGACACAACACCTTATTTGACGGATATGATCTGTCTTTATCAGGCTACCACTTATGCACCCAAAAAGTGACCCAGACCACCAGCAATGTGGTGGCTTACAAAGCCTCCTACACTGAGAGGGTGTCATGTGGAGGCTGGCTTCCCTGGAAGACTTGTCAGAGGACAGTGTACAAGACAGCGTACCGAACTATGCATGTCAAGGTCACGAAAGACTCAACCAGCTGCTGTGAGGGATACGAGCAAGTTGGCAGCTATTGCGCTTTACCTCTAAACAGAAGTATGGAGTTCACctccaagcctggttcctgccCTGAAAATGGGACAGCAATGTCAAGTTCACGGTGTGAGTGGGACATGGACTGTCCAGGCTGGGAAAAGTGCTGCAGGcccacaaaaataacaaaagagtTCTATGTTTTAGCTGGAGAAAGAGGCTGGAGTTTCAATGTGACAATCACAGTTAAAACAGATTATCAGCAACTTCATGCTCTGGAGAAAGGACTTCTGAACCACACAAGGCTGATATACTCTATGGTGACCGGGGTGCTGAAGTCTCTGGACACGTCTGTGTATCACATTTGCTCATATGACGCAGGCCCTTTCAAGACAGCCTCCCAGCTCCTGCTCAGAGTGGGCCAGCCCACCTCGCTACACACAGTCACCACAGAGCTGCAGCCCATCCTTTGGTCAATCGAGGAGGTCTCCAACGTAGAAGTGCAAGATACAAATGAATGTGCCCATGCAGAACTCAATAGCTGCTCAACAGATGCCCTCTGCCTCAACACTGATGGTTCCTACAGCTGTGTATGTCGTCCAGGATTTACTGATCCAAGTCCCAACTCAACAGGGACAGTTTGCATAGAGGCTCTTGCCAATGGGACACAACTGCCCCTTACATACAGCACAGTGATGCCATGGACACCAAACAGTACAACTGGTGACTCGCATaaggacacactgacacacaacagtACCCTGATTGACAGATATTACCATGAAAGCACAGATGCAACAGCCATAACTGACAAAGGATGGCAGTGGCTTACAGATGTGCAGGACAATTTGACCCTGTCCCTGCCAGCCAAAACAACACATGCAAGCCTAAAGACAACCGCCTGGGACAATCCTACCACCATTGCAAGGACACATCACCAGTTCATCACAGAAAAAGATCTTCTAGACAGAACAGTGCAGAATGTCCTCCTCAATGTTTCTACCACTTCTGAAGACACAAAACCCAGTGCCAAACCCATAGACACAAAGAGCAGTCTTTGGAGCTCCCCGGAACCTCTTACGAGCGTCACGCAAGTGGGCCATACAAATGGCACCATGCCTCACAATACCAGTTCCACAGTCTCTCCCTACACATTGTCAACGGAGCTACCCTGGAACCCAGCACCTCCCCAGGTCCACTATTCCAGTGTCCAGTACCCCAGCACGGCACCTCCTGCCACGGCTTCCAGAATGGGGTCTGGAACCACTTGCTCTTTCCCAGGAAGATTTACAATCCACATTGAAGTCTGGATTACCCCTGCTCCCATTATTAACCTGGTAGTGCTTAATGTCACAAGCTCTGGTTTCTCTGTGCGCTGGTCTGTGGACTCCTCGGCTGGTCAGGAGTTTGAGCTGCAGCTGCTGAGGGACCTTATTATAGTCATCAGTGAAAAGATTCAGCTCACTACCTGGGCAGCGACAGGACTGGAGCCAGGAGTGATGTACACTGTCAGGGTGGTCTCCATGTCCTGTGGAAACGAGAGTGATGCCGTCTTTCAGGATGTGAAGACAGCTGCACAGGCACTCGAAGCGGAAACCCGAATAACAAATGTGCAGTTCACAGAGGCCTTGAGAAACACCAGCAGTGCAGATGTGCGCTTACCTGTGTCTGTAGACCCTGCATCTCTTCATGGTGTGATCCGTAAGTCTCTTGCTGCAGACATTGGAGCCCTGATAGACTCTGGGAACGTAAGAATCGTCATCTGGAACCTGACCAGTGGCAGTGTGAGAGTGAAGTTCATCTTGCTGTTTTCAACAGACATGAGAGAAGACATCCTGAACATCTCGAGAGCTGTGCTAAACGCACTGAAGGACAGCTCCAAATATGTTGTTGATAGCAACAGCACAAGTATAGTTGATTTTGATGAATGTGCATCTGGGGACGAGGACTGCTCTGCTCACGCGCTCTGCCACAACACGTGGGGCTCCTTCAACTGCTCCTGCGAAGATGCCTTCACAGACACCAACCCACACTGGCCTGGCCACAGCTGCGAAGACATtaatgaatgtgaaaatggtacCAATACCTGCGGCCCTCACGCATCATGTCAAAACACCATCGGCGGATACGTCTGCTCTTGTAAACCTGGATTCTATGACACCAACCCTGGTCAGTCAGGCAGAAGCTGTGCAGATGTGGATGAATGCTCGTCAGATAACATCAGGTGCCATCCGAACGCCACCTGTCAGAACACTGTGGGTGGATACGGCTGCACCTGCAAACCTGGCTTCAAAGACAGTGACTCCGCAAGGCCTGGACAGTACTGTGAAGGTACTGTACAATACTTTCACAAAGTTGACATGATCCAGGATATAATTGAAGGATCTGGAAGTTTTCTGGCCACCATTCAGCTGCTGAATGGGACCGATCCATTCCCGAAAAATTACACACTGTCTCCAGATGAAGAAGTCTTTATTGAAGTGGGGATCAACTCAACCACGCCCCAAGTCAAGCTCATTGTTAACGAGTGCTGGGCTACACCTACCAGCAGCGCTTCTGACCCAACAAAATACAAGTTCATGGAAAACAGCTGTCCCATGGCCAACACCTCCACCAGGGTCATCGAGAATGGAAACTCCACTAGAGCACGTCTGGCCCTGCGCATATTTTCCTTTGTCGACCACAGTGTCATCTACCTGCACTGTCAAGTTCACATCTGCATTGACAATTCAAGTACTAATTCTAACTGCAAACCTGGTTGTAATCTGCGATCAGTGAGATCTACTCAATCTATTGGAATAGGAAAGGCCTCCTGTGGTCCTATTTTTAGGAAGCAAGAGGCGCCATCCCAAGACAAAGGGAGCTCCTATTATCAGACAGGCTTCATCATACTGGGGGTCATCCTGTGCCTGCTGCTCCTGGTGGCGGGGGCCAGCGCAGTCTTCTTTTACAAA

Function

GO: NA

KEGG:

id description
K24499 UMODL1; uromodulin-like 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016250 True 3174 mRNA 0.50 19 13597834 13617644

Neighbor

gene id symbol gene type direction distance location
AMCG00016249 atg101,LOC107751375,LOC107686213,LOC107589731 coding upstream 8861 13583044 ~ 13588973 (+)
AMCG00016242 NA coding upstream 141918 13445038 ~ 13455916 (+)
AMCG00016239 usp25,LOC107653727 coding upstream 350818 13212058 ~ 13247016 (+)
AMCG00016240 NA coding upstream 409441 13185034 ~ 13188393 (+)
AMCG00016231 NA coding upstream 534326 13037182 ~ 13063508 (+)
AMCG00016256 NA coding downstream 59350 13676994 ~ 13705883 (+)
AMCG00016255 uvrag,LOC107577365,LOC107589407,LOC107686127,LOC107691651 coding downstream 89570 13707214 ~ 13714691 (+)
AMCG00016254 uvrag,LOC106603537,LOC106567946 coding downstream 108727 13726371 ~ 13742178 (+)
AMCG00016253 NA coding downstream 158878 13776522 ~ 13783628 (+)
AMCG00016260 emsy coding downstream 263162 13880806 ~ 13895173 (+)
G12331 NA non-coding upstream 45976 13551594 ~ 13551858 (+)
G12330 NA non-coding upstream 51236 13546399 ~ 13546598 (+)
G12289 NA non-coding upstream 124049 13473488 ~ 13473785 (+)
G12220 NA non-coding upstream 524082 13071571 ~ 13073752 (+)
G12217 NA non-coding upstream 531896 13065219 ~ 13065938 (+)
G12347 NA non-coding downstream 20658 13638302 ~ 13639588 (+)
G12368 NA non-coding downstream 39749 13657393 ~ 13659659 (+)
G12406 NA non-coding downstream 212090 13829734 ~ 13830887 (+)
G12487 NA non-coding downstream 564961 14182605 ~ 14184686 (+)
G12489 dyrk1a,LOC107744208 non-coding downstream 577291 14194935 ~ 14196634 (+)
AMCG00016241 NA other upstream 208198 13271584 ~ 13389636 (+)
AMCG00016221 NA other upstream 810935 12778224 ~ 12786899 (+)
AMCG00016213 NA other upstream 1136569 12435136 ~ 12461265 (+)
AMCG00016202 NA other upstream 1591882 11992972 ~ 12005952 (+)
G11921 NA other upstream 1726099 11868825 ~ 11871735 (+)
G12348 NA other downstream 4235 13621879 ~ 13627711 (+)
G12349 NA other downstream 13641 13631285 ~ 13631797 (+)
G12351 NA other downstream 17798 13635442 ~ 13637001 (+)
G12587 NA other downstream 820127 14437771 ~ 14438606 (+)
AMCG00016288 NA other downstream 1127672 14745316 ~ 14783535 (+)

Expression


Co-expression Network