AMCG00016253


Basic Information

Item Value
gene id AMCG00016253
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 13776522 ~ 13783628 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016253
ctgagATACCAGCATGGACTATCCACACCGGACCTCCGGCAAACCCTCCCCAACCTGAAGAACTTCCTAGAGCACGGGCTGATGGTGCGCTGtgatcGAAATCAAATCTCGAGCTCCATCCCAGTGCCCATGAAATCCCAGTTAAGCACCTCAGTGGTGTCGGAGATGGGCTTTCCACCCAGAACCAGCTCTCCAGACAGAGGCCTCCGCAAGCGGGCCAGCTCGGAGACCGACCGGCTGCAGTACCGAACTCCTCCGCCCAGCTACAGCACGGCCGTCGCCCAGCCCATCCCCGTGGTGCCGCCCGCACAGGCAGACACGCCGAGACCTGTGTCCTCCTCCTTGGACACTGGCATTGACTTCGCCAAGAGCATGGAGGCAGACGGGTGTCTCAAAGACGGAGACTCGGACGAGGCCAAGGACAAGCCGGGGGCCCACGGGCAGCAGCATGGCAGCGCAATGAATGGCTCGGCCTCACCCCTGGAGCGGCGCGGTGGTGGAGGGCTCAGCTTCTCCTCAGGCCCCGAGCTGTGCTGCTCGGTGGAACAGGCCGAGGAAATCATGGGCACCGAGGCCACGGGCTTCGGCAGCGTGGAGCAGATGGAGGGCTTCCCCTGCATCCCCGTGGACCACGCCGTGGCTGTGGAGTGTGACGAGCAGGTGCTGGGGGAGCTGGACGCCGCCGGCTTCGAGGAGTTCTCCCGCCGGATCTATGCACTTAATGAGAACATGTCCAGCTTCCGCCGGCTGCGCAAGAACTCGGACAAGTGA

Function

GO: NA

KEGG:

id description
K21249 UVRAG; UV radiation resistance-associated gene protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016253 True 771 mRNA 0.64 2 13776522 13783628

Neighbor

gene id symbol gene type direction distance location
AMCG00016254 uvrag,LOC106603537,LOC106567946 coding upstream 34344 13726371 ~ 13742178 (+)
AMCG00016255 uvrag,LOC107577365,LOC107589407,LOC107686127,LOC107691651 coding upstream 61831 13707214 ~ 13714691 (+)
AMCG00016256 NA coding upstream 70639 13676994 ~ 13705883 (+)
AMCG00016250 NA coding upstream 158878 13597834 ~ 13617644 (+)
AMCG00016249 atg101,LOC107751375,LOC107686213,LOC107589731 coding upstream 187549 13583044 ~ 13588973 (+)
AMCG00016260 emsy coding downstream 97178 13880806 ~ 13895173 (+)
AMCG00016261 NA coding downstream 166279 13949907 ~ 13954292 (+)
AMCG00016264 NA coding downstream 193152 13976780 ~ 13980445 (+)
AMCG00016265 erg,LOC106567682 coding downstream 285653 14069281 ~ 14084493 (+)
AMCG00016269 kcnj6 coding downstream 377865 14161493 ~ 14162428 (+)
G12368 NA non-coding upstream 116863 13657393 ~ 13659659 (+)
G12347 NA non-coding upstream 136934 13638302 ~ 13639588 (+)
G12331 NA non-coding upstream 224664 13551594 ~ 13551858 (+)
G12330 NA non-coding upstream 229924 13546399 ~ 13546598 (+)
G12289 NA non-coding upstream 302737 13473488 ~ 13473785 (+)
G12406 NA non-coding downstream 46106 13829734 ~ 13830887 (+)
G12487 NA non-coding downstream 398977 14182605 ~ 14184686 (+)
G12489 dyrk1a,LOC107744208 non-coding downstream 411307 14194935 ~ 14196634 (+)
G12549 NA non-coding downstream 600277 14383905 ~ 14384657 (+)
G12566 NA non-coding downstream 613621 14397249 ~ 14398414 (+)
G12351 NA other upstream 139521 13635442 ~ 13637001 (+)
G12349 NA other upstream 144725 13631285 ~ 13631797 (+)
G12348 NA other upstream 148811 13621879 ~ 13627711 (+)
AMCG00016241 NA other upstream 386886 13271584 ~ 13389636 (+)
AMCG00016221 NA other upstream 989623 12778224 ~ 12786899 (+)
G12587 NA other downstream 654143 14437771 ~ 14438606 (+)
AMCG00016288 NA other downstream 961688 14745316 ~ 14783535 (+)
AMCG00016329 NA other downstream 2700727 16484355 ~ 16486003 (+)
G13012 NA other downstream 3333165 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 3778790 17562418 ~ 17599581 (+)

Expression


Co-expression Network