AMCG00016261


Basic Information

Item Value
gene id AMCG00016261
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 13949907 ~ 13954292 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016261
GATGGGGTTTGGAAACTTGGGCGAGACCCATGTAGATCAGCGGAAGGAGGGGGAACTGTGCTCAGGGTCCTGCCACGCAGAGCAGGTCCTGCAAATCCTGAACTCGTACCGGCAGAGCGGCACCTTCACCGATGTGGTCCTGCAGGTGGGGGGCAGCGAGTTCCCCTGCCACCGCGCCACACTGTCCGCCAGCAGCCTTTACTTTCGCACCATGTTCCACAGTCAGCTGCTGGAGAGCCGCCAGTCCTTGGTGGTGCTGCGGGACATCTCGGCCACCACCATGGAGAACCTGCTGAACTTCATGTACGAGGGCAAGGTGGACATCCACGAGGAAAACGTGGAGAGTGTCTTCAGGGCAGCCGACCTGCTGGGGGTCTCTGTGCTCAGCAAGGCCTGTGTCCGCTTCCTGGAGAAGCAGGTCGACCACTCCAACTGCCTGGGCATCATGAACTTTGCCAGCTCCTATTTCATTCGCCCTTTGACCGAGAAGTGTCAGAAGCTTGTCTTTGAGGACTTTGTGAAGGTCTACAAGCACGAGGAGTTCCTCACACTGTCCAAGGAGCAGATGGTGGAGCTGCTGTCCAGCGAGGAGCTGCTGGTGGAGCGCGAAGAGGTGCTGGTCGAGGCTGTGCTGAAGTGGGTTCACCATGATCCCAGCGGCAGGAAGGCGGCGCTGAGGGACCTGCTGGAGCTAGTCCACCTGCCACTGGTGGACCCTGCCTTTTTCCTCAGCACTGTGGAAACCGATGTCCTCGTCCAGGACTGCAAGGACTGCCGGCCTTTGCTGCTGGAGGCCAGGAAGTACCAAGTCTTCGGAAATGAAGAGAACTCCGCCACAACCCGGCCCAGAAGGTCAATGGGACGAGTGGAGATGATCGTAGTGATTGGAGGCTGCGATAAGAACAGCTATGCAAAGCTGTCCTTCACTGAGAAGCTCAACACTCACACTAAGGAGTGGCTCCCCTCAGCGTCGATCCCAGGATACTCAAAGTCCGAATTTGCTGCCTGTGGTCAGTTGAACAGCAGTGACGTGTGGCGACACATCTCTCAGCTGGACACTTGGGTTCGTGTTGCCCCTCTGAACAAAGGCAGGTGGCGGCACAAGATGGCAGCCCTCCGCGGGAagCTGTACGCGGTTGGAGGCTTCAACGGCATGGAGAGGCTGCTCAGCGTGGAGAGCTACAGCCCCTTTGATAACCATTGGCAGCCGGTGGCCCCTCTGCTGCTGCCTGTGAGCTCGGCCGCTGTAGCAGCCTGTGGCGGGAAGCTGTACGTCATCGGTGGGGCAGTGCAGTGCTATGACCCCGTGGAAGACAAGTGGAGCTACATGGCCCCTTGCCCGTTCACTCAGCGATGCATTAACGCTGCAGCCTTCCATGACACCATCTATGTGGTTGGAGGCCTCATGGACAAGATGTACAGCTTCAGCCCGCAGAAAAACACCTGGAGTGAAGTTGGTGTCTTGCCTAGCCCAATTGAGAGCTGTGGTTTGACTGCGTGTGACGGCAAGATCTACATTCTTGGCGGGCGAAATGAATACGGCATCGGCACCGACAGGATCTACGTCTTTGATCCTAAAACATCCGCGCTGGAGGAGGAGCCGCCCATGACCCGCTGCGTGAGCTACCACGGATGCGTCACTGTGGTCCAGCGCCAAACCCCAAAGCCC

Function

GO: NA

KEGG:

id description
K10461 KLHL24_35; kelch-like protein 24/35

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016261 True 1669 mRNA 0.58 6 13949907 13954292

Neighbor

gene id symbol gene type direction distance location
AMCG00016260 emsy coding upstream 54734 13880806 ~ 13895173 (+)
AMCG00016253 NA coding upstream 166279 13776522 ~ 13783628 (+)
AMCG00016254 uvrag,LOC106603537,LOC106567946 coding upstream 207729 13726371 ~ 13742178 (+)
AMCG00016255 uvrag,LOC107577365,LOC107589407,LOC107686127,LOC107691651 coding upstream 235216 13707214 ~ 13714691 (+)
AMCG00016256 NA coding upstream 244024 13676994 ~ 13705883 (+)
AMCG00016264 NA coding downstream 22488 13976780 ~ 13980445 (+)
AMCG00016265 erg,LOC106567682 coding downstream 114989 14069281 ~ 14084493 (+)
AMCG00016269 kcnj6 coding downstream 207201 14161493 ~ 14162428 (+)
AMCG00016270 NA coding downstream 222500 14176792 ~ 14177130 (+)
AMCG00016273 dscr3 coding downstream 269596 14223888 ~ 14233628 (+)
G12406 NA non-coding upstream 119020 13829734 ~ 13830887 (+)
G12368 NA non-coding upstream 290248 13657393 ~ 13659659 (+)
G12347 NA non-coding upstream 310319 13638302 ~ 13639588 (+)
G12331 NA non-coding upstream 398049 13551594 ~ 13551858 (+)
G12330 NA non-coding upstream 403309 13546399 ~ 13546598 (+)
G12487 NA non-coding downstream 228313 14182605 ~ 14184686 (+)
G12489 dyrk1a,LOC107744208 non-coding downstream 240643 14194935 ~ 14196634 (+)
G12549 NA non-coding downstream 429613 14383905 ~ 14384657 (+)
G12566 NA non-coding downstream 442957 14397249 ~ 14398414 (+)
G12589 NA non-coding downstream 494520 14448812 ~ 14449212 (+)
G12351 NA other upstream 312906 13635442 ~ 13637001 (+)
G12349 NA other upstream 318110 13631285 ~ 13631797 (+)
G12348 NA other upstream 322196 13621879 ~ 13627711 (+)
AMCG00016241 NA other upstream 560271 13271584 ~ 13389636 (+)
AMCG00016221 NA other upstream 1163008 12778224 ~ 12786899 (+)
G12587 NA other downstream 483479 14437771 ~ 14438606 (+)
AMCG00016288 NA other downstream 791024 14745316 ~ 14783535 (+)
AMCG00016329 NA other downstream 2530063 16484355 ~ 16486003 (+)
G13012 NA other downstream 3162501 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 3608126 17562418 ~ 17599581 (+)

Expression


Co-expression Network