AMCG00016264


Basic Information

Item Value
gene id AMCG00016264
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 13976780 ~ 13980445 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016264
CTCAAACTGTTAAACCTCTACGCTGCTCTGTGACTCCGCGGACTCCACAGCGCCTCTGCTGGCCCGGCGCTATCAGGACACCAGCGCGGCCTAGCACGACAGGCCGCTTTCTCAGCTCGGCCAGCCGGGGATTTACTCTGACATTGCCCAGCAGCCAGACTGCAGTAGCGCACAAAGGACAGCCCGATGGCCACGTTTTTTGGCGAGGTTGTGTCTGTCTACTCCCGGGCggtggaggaggatgaagaggaggaggaggaggaggaggaggacgcgGAGATCCGCAGGGAAGTGCAGAAGCAGAGAGAAGTGCACCTAAACTGGAGGTCAGAAATCGCAGAGTCAATAGAAAGTTCCAGCGACAAGACGTTTCAGTGCTCAGACCTGGTCATAGCAGTGGGGCAAAATGCATCAGGATTTCTCTCGGCCTTTGTGCTAAGCACGGGGAACTGGGACGTGGTGGGAACTGTCACGCTGTGGAACGAGAGGACCAAAGGCCCCAGTCAGGTGACCAACACTCAGCTGCCAGAGGAGTCCAGATGTGTGCTCTACAGGCAGGCAGCATGCCCCTCGGTTGTGATATGCCAGTGTACTTACTACGTAGCTGAAGACCAGTTATTCCAGTGGACTGAAAAGGTGTTGGGGAGCATCCAGAGGAGGGGGCTGCGTGTGCTGGTGCTGTCCGACTGCTCCGTCGCCGAGTACAAGACCTCCGAGTGCATCACAGCTAGTCCGTCTCCGTTCCTGAGAACACTGAAGACCAGCGAGTACAGAGATGCCCTGCGCTGCCCCCTGATGGAGCAGCCCAACATCCTCACAGGCCTTCCTGCAGCAGTGTTGAGTCACTGTCAGGTGCATCGCATCCCTGCTGTCGTTTATCAGTGCTACAGCGACGTTGCCTGTCCCGATTCGCTCACCATGGAGGCCTACAGGCCAGCACTCTCTTGCCTCTCTAGCAAGTTAGGAAAGGTTGACTACAATCCTAGCACTGAAGTCCTCAGGAAGGTGGTAAGAGTCAGTGAAGCTCAGAGTAACTTGTACACTTGAACCCATTCCCCcccatgtctgttttttttttttttttttaaaagcacttgtaTGTTAAATACTGGATGAATAAATTACTTCAATAACAAATTATCAAAATCAATACACTTATTTTggtttaaatactttttttttgttcttcctgcactgtattatgtagtCAGATGTTTTTCCCAGCTTTAGGTTTCAATATACCAtggaaacagac

Function

GO: NA

KEGG:

id description
K11875 PSMG1, DSCR2, PAC1; proteasome assembly chaperone 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016264 True 1255 mRNA 0.52 7 13976780 13980445

Neighbor

gene id symbol gene type direction distance location
AMCG00016261 NA coding upstream 22488 13949907 ~ 13954292 (+)
AMCG00016260 emsy coding upstream 81607 13880806 ~ 13895173 (+)
AMCG00016253 NA coding upstream 193152 13776522 ~ 13783628 (+)
AMCG00016254 uvrag,LOC106603537,LOC106567946 coding upstream 234602 13726371 ~ 13742178 (+)
AMCG00016255 uvrag,LOC107577365,LOC107589407,LOC107686127,LOC107691651 coding upstream 262089 13707214 ~ 13714691 (+)
AMCG00016265 erg,LOC106567682 coding downstream 88836 14069281 ~ 14084493 (+)
AMCG00016269 kcnj6 coding downstream 181048 14161493 ~ 14162428 (+)
AMCG00016270 NA coding downstream 196347 14176792 ~ 14177130 (+)
AMCG00016273 dscr3 coding downstream 243443 14223888 ~ 14233628 (+)
AMCG00016272 NA coding downstream 278164 14258609 ~ 14264073 (+)
G12406 NA non-coding upstream 145893 13829734 ~ 13830887 (+)
G12368 NA non-coding upstream 317121 13657393 ~ 13659659 (+)
G12347 NA non-coding upstream 337192 13638302 ~ 13639588 (+)
G12331 NA non-coding upstream 424922 13551594 ~ 13551858 (+)
G12330 NA non-coding upstream 430182 13546399 ~ 13546598 (+)
G12487 NA non-coding downstream 202160 14182605 ~ 14184686 (+)
G12489 dyrk1a,LOC107744208 non-coding downstream 214490 14194935 ~ 14196634 (+)
G12549 NA non-coding downstream 403460 14383905 ~ 14384657 (+)
G12566 NA non-coding downstream 416804 14397249 ~ 14398414 (+)
G12589 NA non-coding downstream 468367 14448812 ~ 14449212 (+)
G12351 NA other upstream 339779 13635442 ~ 13637001 (+)
G12349 NA other upstream 344983 13631285 ~ 13631797 (+)
G12348 NA other upstream 349069 13621879 ~ 13627711 (+)
AMCG00016241 NA other upstream 587144 13271584 ~ 13389636 (+)
AMCG00016221 NA other upstream 1189881 12778224 ~ 12786899 (+)
G12587 NA other downstream 457326 14437771 ~ 14438606 (+)
AMCG00016288 NA other downstream 764871 14745316 ~ 14783535 (+)
AMCG00016329 NA other downstream 2503910 16484355 ~ 16486003 (+)
G13012 NA other downstream 3136348 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 3581973 17562418 ~ 17599581 (+)

Expression


Co-expression Network