Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016269 |
| gene name | kcnj6 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 14161493 ~ 14162428 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| kcnj6 | Human ortholog(s) of this gene implicated in alcohol use disorder and heroin dependence. Orthologous to human KCNJ6 (potassium inwardly rectifying channel subfamily J member 6). |
| description |
|---|
| PREDICTED: G protein-activated inward rectifier potassium channel 2 |
| id | name | namespace |
|---|---|---|
| GO:0071805 | potassium ion transmembrane transport | biological_process |
| GO:0034765 | regulation of ion transmembrane transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0015467 | G-protein activated inward rectifier potassium channel activity | molecular_function |
| id | description |
|---|---|
| K05000 | KCNJ6, KIR3.2; potassium inwardly-rectifying channel subfamily J member 6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016269 | True | 936 | mRNA | 0.52 | 1 | 14161493 | 14162428 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016265 | erg,LOC106567682 | coding | upstream | 77000 | 14069281 ~ 14084493 (+) |
| AMCG00016264 | NA | coding | upstream | 181048 | 13976780 ~ 13980445 (+) |
| AMCG00016261 | NA | coding | upstream | 207201 | 13949907 ~ 13954292 (+) |
| AMCG00016260 | emsy | coding | upstream | 266320 | 13880806 ~ 13895173 (+) |
| AMCG00016253 | NA | coding | upstream | 377865 | 13776522 ~ 13783628 (+) |
| AMCG00016270 | NA | coding | downstream | 14364 | 14176792 ~ 14177130 (+) |
| AMCG00016273 | dscr3 | coding | downstream | 61460 | 14223888 ~ 14233628 (+) |
| AMCG00016272 | NA | coding | downstream | 96181 | 14258609 ~ 14264073 (+) |
| AMCG00016271 | NA | coding | downstream | 107889 | 14270317 ~ 14282590 (+) |
| AMCG00016279 | hlcs | coding | downstream | 133934 | 14296362 ~ 14298779 (+) |
| G12406 | NA | non-coding | upstream | 330606 | 13829734 ~ 13830887 (+) |
| G12368 | NA | non-coding | upstream | 501834 | 13657393 ~ 13659659 (+) |
| G12347 | NA | non-coding | upstream | 521905 | 13638302 ~ 13639588 (+) |
| G12331 | NA | non-coding | upstream | 609635 | 13551594 ~ 13551858 (+) |
| G12330 | NA | non-coding | upstream | 614895 | 13546399 ~ 13546598 (+) |
| G12487 | NA | non-coding | downstream | 20177 | 14182605 ~ 14184686 (+) |
| G12489 | dyrk1a,LOC107744208 | non-coding | downstream | 32507 | 14194935 ~ 14196634 (+) |
| G12549 | NA | non-coding | downstream | 221477 | 14383905 ~ 14384657 (+) |
| G12566 | NA | non-coding | downstream | 234821 | 14397249 ~ 14398414 (+) |
| G12589 | NA | non-coding | downstream | 286384 | 14448812 ~ 14449212 (+) |
| G12351 | NA | other | upstream | 524492 | 13635442 ~ 13637001 (+) |
| G12349 | NA | other | upstream | 529696 | 13631285 ~ 13631797 (+) |
| G12348 | NA | other | upstream | 533782 | 13621879 ~ 13627711 (+) |
| AMCG00016241 | NA | other | upstream | 771857 | 13271584 ~ 13389636 (+) |
| AMCG00016221 | NA | other | upstream | 1374594 | 12778224 ~ 12786899 (+) |
| G12587 | NA | other | downstream | 275343 | 14437771 ~ 14438606 (+) |
| AMCG00016288 | NA | other | downstream | 582888 | 14745316 ~ 14783535 (+) |
| AMCG00016329 | NA | other | downstream | 2321927 | 16484355 ~ 16486003 (+) |
| G13012 | NA | other | downstream | 2954365 | 17116793 ~ 17121932 (+) |
| AMCG00016379 | cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 | other | downstream | 3399990 | 17562418 ~ 17599581 (+) |
