AMCG00016284


Basic Information

Item Value
gene id AMCG00016284
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 14383900 ~ 14389479 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016284
CTTCAAGACCCTCGGCGCGTGCGGAACCGAGCCGCTGCGCGTTGTTTCCCGCCGGCGTGCTTTCCaggcgcgcgcacacacacacgcacacacgtgtTCGCGTTTACCCTCGACTATGCctaagaaagggaaaaaagctgCATCAAAGATCTGCAACGAAGATGTTCCTTCCAAACGAAGCAAGACAGACGAGGCCTCCACCGATGTGCCTTCGCCCTTGAGTTTTGACAGCCCGGCCAGCCTGTTCCAGAGCCTCATCTCTCCCATGGGGCTTCAGCCGTTCTTCCAGGATTACTGGGAGAAGAAACCCCTGCTCCTCCAGAGGAACGACCCCTCCCTGGCCGCTTACTACCAGTCTCTCTTCCAGCTCTCGGACCTGAAGGGCCTCTGTGGCCGAGCGCTCGAATACGGCAGGGATCTCAACGTCTGTCGCTGTGTCAATGGGAAGAAGAAGGTGTTGAACAAAGATGGCAAGGTCAACTACAGCCAACTGAAAAAGGACTTTGACACCAAGAAGGCCACGATACAGTTTCATCAGCCCCAGAGGTTCAAGGACGAACTGTGGAGGATTCAGGAGAAGCTGGAGTGCTTCTTCGGCGCCCTGGTTGGGTCAAACGTCTACATCACACCACAGAAGGGACAGGGGCTGCCGCCACACTACGATGATGTCGAGCACTGGCGTCTCTATGAGCCCACGGTGCCCCTGCCTCGAGAGTACAGCCTGGAGACGGAGGAGCGCATTGGCAGCCCCACACACGAGTTTATACTGAAGGCCGGGGATTTGCTGTATTTCCCAAGAGGTGTAATCCATCAGGCTGACACCCCGGCTGGAGTTGAACACTCGACTCATCTAACCATCAGCACCTACCAGAACATGTCTTGGGGAGATTTCCTGATGGATGCGATGCCTGGCGTTGTGCTCGATTCTATTGGGAACGACGTTGCGTTGAGAGCAGGGCTGCCCAGGAACATACTGATGGACACAAACTCATCCCATTCCACAGCCAAGCAGCTGGCAGGGTTTCTGCGACGCCTCGCCGACAACATGGAAGGGCAGGAATTGAGATCGATGGACATGAAGAGAGATTTCATATCCAGCAGGCTGCCCCCTTGTCTGGAGGACGGTTCCGAGGTCATGCCAGATGGGAAGATGCCGGCACTGGATGATACGGTGCGACTCCTGTTCCAAGACCATGTCCTGCTGTCAGTGGAGCGTAGTGAAGCAGTGATGGTAAGACTGTTTGGGACGGTGGAGGCCAAGAGTGAAAGTGGAGGCCTGGACGAGCCGGCGGAGCTGGTGGTGTACCTGCTGCACTCGCTGAGGAACAACAGGGAGATGCACATGATGGGGCAGCCAGAGGACGGCGATGGCCACCAGGACCATCCCTCCGAGGCACAAGGGCTGAAGTTCCCCCTCTCCCACCTGGGGGCTCTGAAGCAGCTGCTGAGCCGAGACTCGGTGCCGGTGAGGGACCTGCTGCTGGAgcaggagagcgagagacagaacCTGGCCCTGGCTCTCTGGACCGAGGGTTTGATTCACGTCTGCTAGCAGAACTCAAAagctacacacacagcctgGCCCTGCAGTGTTCGACTGTTCAAGGTCATTTACTCTGTCTACACATGTGCTTTAATATCTTTAAGAAGCTTGTATTGGgttttgcatttgttatttgatgtatatatacagctcatgtatatatatagagacaGAATATAGATCATACATGATAGTGGGGATCATTCATGTCAGTTCATAAAAGCTGGGTAAAGCAGCTGTATCAATAGATCCCATTTTATCTGTTCTTATTTCAGCAGTTGCTGTTTTTTATAATCTATGTGATTATATTTGTATGCCGTACTGTAGCTGctataaataactataaatatagCTAGAAAGAAAAGAGAGTAACGCTTTCTAAAGTGAGATCAGACGCTTGCTCTGACAAGGCAGTTTGCTGTGGTATTGGTTTTGAGTCATTACGCTAGCCTGCAGGAGCTCAGATCTCTGGCTCAGATTAGTGGTTAGGGTGtctttttccctctccctctcaggggTTTGATGTCTGTGTGGAACAGGTTAGTTTTCAGctgtgactgcagtgtgtgcagacCCTGTGTTTCTGTAAGAGAATAAAGCGGGAGTTAAA

Function

GO: NA

KEGG:

id description
K21760 RIOX2, MINA; bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016284 True 2153 mRNA 0.52 10 14383900 14389479

Neighbor

gene id symbol gene type direction distance location
AMCG00016280 sim2,LOC108234774 coding downstream 59725 14306299 ~ 14324175 (-)
AMCG00016277 NA coding downstream 114585 14268166 ~ 14269315 (-)
AMCG00016276 NA coding downstream 116085 14267636 ~ 14267815 (-)
AMCG00016274 NA coding downstream 125754 14233698 ~ 14258146 (-)
AMCG00016275 dyrk1a,LOC108435291 coding downstream 184741 14192347 ~ 14199159 (-)
AMCG00016283 tiprl coding upstream 30 14389509 ~ 14393661 (-)
AMCG00016282 NA coding upstream 47909 14437388 ~ 14456052 (-)
AMCG00016287 NA coding upstream 188378 14577857 ~ 14591958 (-)
AMCG00016289 zpld1,LOC105030973,LOC103372413 coding upstream 319909 14709388 ~ 14733458 (-)
AMCG00016294 NA coding upstream 460371 14849850 ~ 14851113 (-)
G12373 NA non-coding downstream 724241 13657443 ~ 13659659 (-)
G12358 NA non-coding downstream 744310 13638303 ~ 13639590 (-)
G12359 NA non-coding downstream 744750 13627255 ~ 13639150 (-)
G12235 NA non-coding downstream 1283676 13097991 ~ 13100224 (-)
G12096 NA non-coding downstream 1745202 12638493 ~ 12638698 (-)
G12585 NA non-coding upstream 38146 14427625 ~ 14428817 (-)
G12594 NA non-coding upstream 42133 14431612 ~ 14436531 (-)
G12595 NA non-coding upstream 74138 14463617 ~ 14463823 (-)
G12702 NA non-coding upstream 803723 15193202 ~ 15193641 (-)
G12707 cntn5 non-coding upstream 1027544 15417023 ~ 15417518 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 824716 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 1513340 12849878 ~ 12870560 (-)
AMCG00016211 NA other downstream 2054867 12323161 ~ 12329033 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other downstream 2436578 11832428 ~ 11947322 (-)
AMCG00016194 NA other downstream 2602353 11766152 ~ 11781547 (-)
AMCG00016281 NA other upstream 30877 14420356 ~ 14427290 (-)
AMCG00016293 NA other upstream 395719 14785198 ~ 14791969 (-)
AMCG00016327 NA other upstream 2081132 16470611 ~ 16475170 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 2469062 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 2476839 16866318 ~ 16870002 (-)

Expression


Co-expression Network