Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016295 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 14935995 ~ 14944083 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016295 | True | 216 | mRNA | 0.53 | 2 | 14935995 | 14944083 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016291 | NA | coding | upstream | 90152 | 14844836 ~ 14845843 (+) |
| AMCG00016290 | NA | coding | upstream | 92138 | 14830727 ~ 14843857 (+) |
| AMCG00016292 | NA | coding | upstream | 108620 | 14817875 ~ 14827375 (+) |
| AMCG00016286 | cbl,LOC102193754 | coding | upstream | 360446 | 14540441 ~ 14575549 (+) |
| AMCG00016285 | cblb,LOC107576804,LOC107699267 | coding | upstream | 432304 | 14502134 ~ 14503691 (+) |
| AMCG00016298 | dlg2 | coding | downstream | 43780 | 14987863 ~ 15041451 (+) |
| AMCG00016296 | LOC107589373,LOC106951534,LOC102797415,LOC103129241,LOC106903426,LOC107100026 | coding | downstream | 108962 | 15053045 ~ 15054925 (+) |
| AMCG00016297 | dlg2 | coding | downstream | 143796 | 15087879 ~ 15105018 (+) |
| AMCG00016300 | NA | coding | downstream | 422435 | 15366518 ~ 15367769 (+) |
| AMCG00016299 | cntn5 | coding | downstream | 435241 | 15379324 ~ 15406751 (+) |
| G12605 | NA | non-coding | upstream | 320286 | 14576587 ~ 14615709 (+) |
| G12591 | NA | non-coding | upstream | 484241 | 14451510 ~ 14451754 (+) |
| G12589 | NA | non-coding | upstream | 486783 | 14448812 ~ 14449212 (+) |
| G12566 | NA | non-coding | upstream | 537581 | 14397249 ~ 14398414 (+) |
| G12549 | NA | non-coding | upstream | 551338 | 14383905 ~ 14384657 (+) |
| G12712 | NA | non-coding | downstream | 519994 | 15464077 ~ 15464312 (+) |
| G12763 | NA | non-coding | downstream | 797103 | 15741186 ~ 15743647 (+) |
| G12816 | NA | non-coding | downstream | 975500 | 15919583 ~ 15924725 (+) |
| G12886 | NA | non-coding | downstream | 1589021 | 16533104 ~ 16533381 (+) |
| G12896 | NA | non-coding | downstream | 1664635 | 16608718 ~ 16608985 (+) |
| AMCG00016288 | NA | other | upstream | 152460 | 14745316 ~ 14783535 (+) |
| G12587 | NA | other | upstream | 497389 | 14437771 ~ 14438606 (+) |
| G12351 | NA | other | upstream | 1298994 | 13635442 ~ 13637001 (+) |
| G12349 | NA | other | upstream | 1304198 | 13631285 ~ 13631797 (+) |
| G12348 | NA | other | upstream | 1308284 | 13621879 ~ 13627711 (+) |
| AMCG00016329 | NA | other | downstream | 1540272 | 16484355 ~ 16486003 (+) |
| G13012 | NA | other | downstream | 2172710 | 17116793 ~ 17121932 (+) |
| AMCG00016379 | cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 | other | downstream | 2618335 | 17562418 ~ 17599581 (+) |
| AMCG00016407 | NA | other | downstream | 3474934 | 18419017 ~ 18473689 (+) |
| AMCG00016429 | lamtor1,LOC106581407 | other | downstream | 4930973 | 19875056 ~ 19879725 (+) |
