AMCG00016296 (LOC107589373,LOC106951534,LOC102797415,LOC103129241,LOC106903426,LOC107100026)


Basic Information

Item Value
gene id AMCG00016296
gene name LOC107589373,LOC106951534,LOC102797415,LOC103129241,LOC106903426,LOC107100026
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 15053045 ~ 15054925 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016296
ATGCATGGCAGAGCGGACACTTCTGACTATATGTACTATCTGGCTTGTCTGTACAGAGAACCGCGGAAGATCGTGCTGCACAAGGGCTCCACGGGCCTGGGCTTCAACATCGTGGGCGGCGAGGATGGGGAAGGGATCTTTGTGTCCTTCATCCTGGCCGGGGGGCCCGCCGACCTGAGCGGAGAGCTGCGGAGGGGAGACCAGATCCTGTCGGTAAATGGCATAGATCTGCGGGGTGCTACACATGAACAGGCCGCAGCAGCCCTGAAAGGAGCCGGGCAGACGGTGACCATCATCGCTCAGTATCGGCCAGAA

Function

NR:

description
PREDICTED: disks large homolog 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016296 True 315 mRNA 0.60 2 15053045 15054925

Neighbor

gene id symbol gene type direction distance location
AMCG00016298 dlg2 coding upstream 11594 14987863 ~ 15041451 (+)
AMCG00016295 NA coding upstream 108962 14935995 ~ 14944083 (+)
AMCG00016291 NA coding upstream 207202 14844836 ~ 14845843 (+)
AMCG00016290 NA coding upstream 209188 14830727 ~ 14843857 (+)
AMCG00016292 NA coding upstream 225670 14817875 ~ 14827375 (+)
AMCG00016297 dlg2 coding downstream 32954 15087879 ~ 15105018 (+)
AMCG00016300 NA coding downstream 311593 15366518 ~ 15367769 (+)
AMCG00016299 cntn5 coding downstream 324399 15379324 ~ 15406751 (+)
AMCG00016301 cntn5 coding downstream 369697 15424622 ~ 15442208 (+)
AMCG00016307 NA coding downstream 474835 15529760 ~ 15547602 (+)
G12605 NA non-coding upstream 437336 14576587 ~ 14615709 (+)
G12591 NA non-coding upstream 601291 14451510 ~ 14451754 (+)
G12589 NA non-coding upstream 603833 14448812 ~ 14449212 (+)
G12566 NA non-coding upstream 654631 14397249 ~ 14398414 (+)
G12549 NA non-coding upstream 668388 14383905 ~ 14384657 (+)
G12712 NA non-coding downstream 409152 15464077 ~ 15464312 (+)
G12763 NA non-coding downstream 686261 15741186 ~ 15743647 (+)
G12816 NA non-coding downstream 864658 15919583 ~ 15924725 (+)
G12886 NA non-coding downstream 1478179 16533104 ~ 16533381 (+)
G12896 NA non-coding downstream 1553793 16608718 ~ 16608985 (+)
AMCG00016288 NA other upstream 269510 14745316 ~ 14783535 (+)
G12587 NA other upstream 614439 14437771 ~ 14438606 (+)
G12351 NA other upstream 1416044 13635442 ~ 13637001 (+)
G12349 NA other upstream 1421248 13631285 ~ 13631797 (+)
G12348 NA other upstream 1425334 13621879 ~ 13627711 (+)
AMCG00016329 NA other downstream 1429430 16484355 ~ 16486003 (+)
G13012 NA other downstream 2061868 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 2507493 17562418 ~ 17599581 (+)
AMCG00016407 NA other downstream 3364092 18419017 ~ 18473689 (+)
AMCG00016429 lamtor1,LOC106581407 other downstream 4820131 19875056 ~ 19879725 (+)

Expression


Co-expression Network