AMCG00016298 (dlg2)


Basic Information

Item Value
gene id AMCG00016298
gene name dlg2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 14987863 ~ 15041451 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016298
ATGAACTACATCATGGTGAACAATGTGACCGTTTTAAATCAGAAGTACCACCGGGGGAGTGTGCCCAACCTGGTGCCCAAACCCCAGAAAGACATCCAGGAGAGCAAACAGTTCCAGAAGCGATTCTCTGTGGATTTACTGAAAGGGGGCTCCCCGGACTCGAACACGGTCAAGTGGCCCTCGCTGGTCACAATCtgtaaatggaaacaaaacttTGCTGAACGCATATTGAAAAGACATAGGAGCAATCTGAACAGCTTTCAGCAGGAGGAAATGTGGTATCTGATCCTGTGCTCCGGCTTTACTATCCTGCGACTCTGTCTGAAAATTATCCTCAGGCTTCAGCGAAAAGTCGTCGGCTCCTGTGAAAAACAGATCTCTGATGCGAGCCAGAGCTCACCCATCTCTGACAAGTATATCCAGTTGAGAAAATCAGAGAGAGGAGAACTAAAAACAAGAGATCGTATCGGGATGACTGCTTATTTGAACAAACAGCATAGCTGCTGCAGGGATCCAGAAGGCAGGAATGTAGAGCTAGTGATGAGTGACTCCCCGTGTTCCTGTGGCTGGCAGCATGACCCCCATGGATACTATTACAACTCCCAGACACTACCTTCTACAGGGGCGACACTGGCACGCAACAGGGCGAAGCTCACCTCCATGCGCACAGAGAGTGTGTGGAAAAGCCCCAGCAAAAGTGTAGCCCGAGGCAAGGGGGCTAACTCTGAGTGGTGGTCCGATTGCAGCTGTCAACACGGCTGGCACGACCCCTTCCAGGCCAGTCCTGCACCAATAATTGTGAACACGGAAACATTGGACACTGTACCATATGTAAATgggacagaaattgaatatgaGTTTGAAGAAATTACATTGGAAAGGGGTAACTCAGGGCTGGGATTTAGCATTGCAGGAGGGACAGACAACCCCCACATCGGCGATGACCCTGGTATATTCATTACCAAGATTATTCCCGGGGGGGCCGCAGCCGAGGACGGTCGACTCAGaGTCAATGACTGTATCCTACGGGTGAATGATGCCGATGTCTCTGAAGTCTCGCACAGTAAAGCGGTGGAGGCCCTGAAAGTAGCAGGATCAATTGTTCGGCTCTACGTGCGCCGCAGAAGACCGATGCTAGAGACCGTAATAGAAATTAAACTCATTAAAGGACCAAAagGGCTTGGATTTAGTATTGCAGGTGGAGTCGGGAACCAACACATCCCAGGAGACAACAGCATTTATGTGACCAAAATCATCGATGGAGGAGCAGCACAGAAAGACGGGAGGTTGCAAGTGGGTGACCGACTGCTTATGGTGAACAACTATAGTTTGGAAGAAGTATCCCATGAAGAAGCTGTAGccatattgaaaaatacatctgaTGTAGTCTATCTGAAGGTGGGAAAGCCTACTAcatTCTCTCCACCTATGGAAAACCATATCTCCTCCCCTGGCAACAATGGCACTCTGGAGTACAAATCCAGTCTTCCCCCAATTTCACCAGGGAGATATTCCCCCATTCCCAAACACATGCTCGGGGAAGAGGACATTAACAGGCCTCCTGAGCCAGTGTACAGCACTGTGAACAAACTGTGTGACAAACCACCTTCTCCCCGACACTATTCCCCTGTCGAATGTGACAAAAGTCTCATTCACTCAATTCCTTTCCCTCACTATCACATAGGCCTCCTTCCCGACTCTGAGATCACA

Function

symbol description
dlg2 Predicted to be involved in several processes, including establishment or maintenance of epithelial cell apical/basal polarity; negative regulation of phosphatase activity; and receptor clustering. Predicted to be located in several cellular components, including axon; perikaryon; and synapse. Predicted to be active in several cellular components, including basolateral plasma membrane; neuromuscular junction; and postsynaptic density membrane. Is expressed in nervous system and neural tube. Orthologous to human DLG2 (discs large MAGUK scaffold protein 2).

NR:

description
PREDICTED: disks large homolog 2 isoform X28

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016298 True 1710 mRNA 0.49 11 14987863 15041451

Neighbor

gene id symbol gene type direction distance location
AMCG00016295 NA coding upstream 43780 14935995 ~ 14944083 (+)
AMCG00016291 NA coding upstream 142020 14844836 ~ 14845843 (+)
AMCG00016290 NA coding upstream 144006 14830727 ~ 14843857 (+)
AMCG00016292 NA coding upstream 160488 14817875 ~ 14827375 (+)
AMCG00016286 cbl,LOC102193754 coding upstream 412314 14540441 ~ 14575549 (+)
AMCG00016296 LOC107589373,LOC106951534,LOC102797415,LOC103129241,LOC106903426,LOC107100026 coding downstream 11594 15053045 ~ 15054925 (+)
AMCG00016297 dlg2 coding downstream 46428 15087879 ~ 15105018 (+)
AMCG00016300 NA coding downstream 325067 15366518 ~ 15367769 (+)
AMCG00016299 cntn5 coding downstream 337873 15379324 ~ 15406751 (+)
AMCG00016301 cntn5 coding downstream 383171 15424622 ~ 15442208 (+)
G12605 NA non-coding upstream 372154 14576587 ~ 14615709 (+)
G12591 NA non-coding upstream 536109 14451510 ~ 14451754 (+)
G12589 NA non-coding upstream 538651 14448812 ~ 14449212 (+)
G12566 NA non-coding upstream 589449 14397249 ~ 14398414 (+)
G12549 NA non-coding upstream 603206 14383905 ~ 14384657 (+)
G12712 NA non-coding downstream 422626 15464077 ~ 15464312 (+)
G12763 NA non-coding downstream 699735 15741186 ~ 15743647 (+)
G12816 NA non-coding downstream 878132 15919583 ~ 15924725 (+)
G12886 NA non-coding downstream 1491653 16533104 ~ 16533381 (+)
G12896 NA non-coding downstream 1567267 16608718 ~ 16608985 (+)
AMCG00016288 NA other upstream 204328 14745316 ~ 14783535 (+)
G12587 NA other upstream 549257 14437771 ~ 14438606 (+)
G12351 NA other upstream 1350862 13635442 ~ 13637001 (+)
G12349 NA other upstream 1356066 13631285 ~ 13631797 (+)
G12348 NA other upstream 1360152 13621879 ~ 13627711 (+)
AMCG00016329 NA other downstream 1442904 16484355 ~ 16486003 (+)
G13012 NA other downstream 2075342 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 2520967 17562418 ~ 17599581 (+)
AMCG00016407 NA other downstream 3377566 18419017 ~ 18473689 (+)
AMCG00016429 lamtor1,LOC106581407 other downstream 4833605 19875056 ~ 19879725 (+)

Expression


Co-expression Network