AMCG00016300


Basic Information

Item Value
gene id AMCG00016300
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 15366518 ~ 15367769 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016300
ATGCCAGATAACATGGCTTGCGGGCTAAAACATGGCTGCGGTGGAACGAATGACATTGCTGATGTGAACAGTCAGGGAGAATTTGAAATGCAGATGCCCTGGTATGCTGAGCCGGATGATGCTATATTTGCCCTGGACTCTGATGAGAAGAAAGTGACACTGAACTGTGAAGCCAGAGGGAACCCCACACCCTCTTACAGATGGCTGTTCAATGGAACAGAAATAGATGTCAGCACTGATTACCGTTACAGCATCATAGATGGCAGCTTGATTATTACCAATCCCAGTGAAGCAAAGGATTTTGGGAGGTACCAGTGCCTGACAGCCAACAGTTTCGGCACCATTATCAGCAGGGATGCTCTTCTACAATTCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016300 True 375 mRNA 0.47 3 15366518 15367769

Neighbor

gene id symbol gene type direction distance location
AMCG00016297 dlg2 coding upstream 261500 15087879 ~ 15105018 (+)
AMCG00016296 LOC107589373,LOC106951534,LOC102797415,LOC103129241,LOC106903426,LOC107100026 coding upstream 311593 15053045 ~ 15054925 (+)
AMCG00016298 dlg2 coding upstream 325067 14987863 ~ 15041451 (+)
AMCG00016295 NA coding upstream 422435 14935995 ~ 14944083 (+)
AMCG00016291 NA coding upstream 520675 14844836 ~ 14845843 (+)
AMCG00016299 cntn5 coding downstream 11555 15379324 ~ 15406751 (+)
AMCG00016301 cntn5 coding downstream 56853 15424622 ~ 15442208 (+)
AMCG00016307 NA coding downstream 161991 15529760 ~ 15547602 (+)
AMCG00016305 NA coding downstream 264619 15632388 ~ 15644947 (+)
AMCG00016306 NA coding downstream 282382 15650151 ~ 15657395 (+)
G12605 NA non-coding upstream 750809 14576587 ~ 14615709 (+)
G12591 NA non-coding upstream 914764 14451510 ~ 14451754 (+)
G12589 NA non-coding upstream 917306 14448812 ~ 14449212 (+)
G12566 NA non-coding upstream 968104 14397249 ~ 14398414 (+)
G12549 NA non-coding upstream 981861 14383905 ~ 14384657 (+)
G12712 NA non-coding downstream 96308 15464077 ~ 15464312 (+)
G12763 NA non-coding downstream 373417 15741186 ~ 15743647 (+)
G12816 NA non-coding downstream 551814 15919583 ~ 15924725 (+)
G12886 NA non-coding downstream 1165335 16533104 ~ 16533381 (+)
G12896 NA non-coding downstream 1240949 16608718 ~ 16608985 (+)
AMCG00016288 NA other upstream 582983 14745316 ~ 14783535 (+)
G12587 NA other upstream 927912 14437771 ~ 14438606 (+)
G12351 NA other upstream 1729517 13635442 ~ 13637001 (+)
G12349 NA other upstream 1734721 13631285 ~ 13631797 (+)
G12348 NA other upstream 1738807 13621879 ~ 13627711 (+)
AMCG00016329 NA other downstream 1116586 16484355 ~ 16486003 (+)
G13012 NA other downstream 1749024 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 2194649 17562418 ~ 17599581 (+)
AMCG00016407 NA other downstream 3051248 18419017 ~ 18473689 (+)
AMCG00016429 lamtor1,LOC106581407 other downstream 4507287 19875056 ~ 19879725 (+)

Expression


Co-expression Network