AMCG00016324


Basic Information

Item Value
gene id AMCG00016324
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 16393971 ~ 16403344 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016324
ATGGCCCAAGAAGCAAAAGTTATTTTCACTTTAACTTTTAAGGAAGCATCTGAGCTTAAGGACGGCATCAACctgaagagaaataaagaagATGGCAAATGTTACATTATCTACAAAGACAAGGAAATGTTGCGAGCATGCAAGAATCAGTGCAAACATCAAGGAGGACTGTTTATTAAAGACATTGAGGACATAAACAGACGAACAGTCCGCTGTACCAAACATTACTGGAAACTGGATGTTGCTACTATGAAATATGTAAATCCACCTGACAGTTTTCATCAAGAAGAGCTTGTTGTTGAAATGGATGAAAGTGGGGGGATTCAACTTATAGAACTGAGCCCCCCTGATCCTTGGCTTTCTGACCCTAGGACTCCTGAAGAGCTTCAATTTGGAGAAGTGCAGATTAACTATCTTACACATGCATGCACGGAGCTCAAACTAGGCAGTAAGAGGATGCTGTTCGACCCCTGGCTTACAGGCCCCGCATTTTCAAGAGGCTGGTGGCTGCTGCATGAGCCCCCAGAAAACTGTCTGGAAACATTGTGCCGTGCTGATTTAATATACATAAGTCACTTGCATGCTGACCATCTCAGctatcccactttaaaaatactttcagaAAAGCGTCCTGACATCCCAGTATTTGTTGGCAATACCTCAAGGCCAGTGTTTTGGTATCTGGACAGAAGTGGAGTAAATTTAACTAACATCAATGTGGTCCCTTTTGGAGTGTGGCAAGAGGTAAGCAGTCACATGATTCTGAACACTGTAGACTGCACACAACCAAATGGAGGGATCCTGCCCCGCAATGTGGATGTAATGATGAGTGACTTTGCAGGAGGGGCTGCTGGATTCCCCATGACTTTCACAGGAGGGAAGTACACTGAGGAATGGAAAGCAAACTTTATAAAGACTGAAAGAAGAAAACTGCTCAACTACAAGGCACAGCTGGTGAAATCCCTACAACCCAGAGTATACTGTCCATTTGCAGGGTATTTTGTAGAGGCTCATCCATCTGACAGGTATATAATggaaacaaacctaaaaaacaACCCTGAGGAGCTCAACAAGCTGATCAATAAGCTAGAGCCTTCTATTACTACATGGACACCGAAACCAGGAGCAGTCCTAGACCTCGCCCGAATCCTGAAAGACCCTGCAGATAGtaaGGCCATCATCAATCCCCCACCTTCGACAAAACTCTACAAAGACAGCTGGGAGTTTGATCTTTATCTGGCTGAGATCAACTCTGCGATCGATTCACAGATATTCCAACACAAAGAGTGGATTATTTTTTACTATAATTGGGCCGGGTTTAGAGAATACAATCTAGTCATAAGGATTAAGAACAGAGTTGGGGTGATACGCCACGTGGTGAAACATGGCATCTTGTGGGATGATCTTTACATTGGCTTCCAGAACCGACTAAGCAGAGACCCAGACATTTACCACCACCAGTTCTGGAATCATTTCCAAACTAATTTGCCACTGACCTCACCAGATTGGGACTTATTCCTGGACCAGATGAATGTGGACCCTGAGAAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016324 True 1551 mRNA 0.44 11 16393971 16403344

Neighbor

gene id symbol gene type direction distance location
AMCG00016314 NA coding upstream 557010 15824997 ~ 15836961 (+)
AMCG00016313 LOC107731450,LOC107703529 coding upstream 668126 15716894 ~ 15725845 (+)
AMCG00016312 yap1,LOC107662128,LOC107758259,LOC107746561,LOC107687356 coding upstream 696712 15683434 ~ 15697259 (+)
AMCG00016311 yap1,LOC107746561,LOC107687356 coding upstream 731711 15660319 ~ 15662260 (+)
AMCG00016306 NA coding upstream 736576 15650151 ~ 15657395 (+)
AMCG00016322 NA coding downstream 26746 16430090 ~ 16435049 (+)
AMCG00016323 pcf11 coding downstream 43284 16446628 ~ 16461315 (+)
AMCG00016330 NA coding downstream 62107 16465451 ~ 16483942 (+)
AMCG00016334 NA coding downstream 102953 16506297 ~ 16520198 (+)
AMCG00016337 NA coding downstream 153894 16557238 ~ 16563218 (+)
G12816 NA non-coding upstream 469246 15919583 ~ 15924725 (+)
G12763 NA non-coding upstream 650324 15741186 ~ 15743647 (+)
G12712 NA non-coding upstream 929659 15464077 ~ 15464312 (+)
G12605 NA non-coding upstream 1778262 14576587 ~ 14615709 (+)
G12591 NA non-coding upstream 1942217 14451510 ~ 14451754 (+)
G12886 NA non-coding downstream 129760 16533104 ~ 16533381 (+)
G12896 NA non-coding downstream 205374 16608718 ~ 16608985 (+)
G12901 NA non-coding downstream 220339 16623683 ~ 16623967 (+)
G12906 NA non-coding downstream 268788 16672132 ~ 16672496 (+)
G12907 NA non-coding downstream 271549 16674893 ~ 16675189 (+)
AMCG00016288 NA other upstream 1610436 14745316 ~ 14783535 (+)
G12587 NA other upstream 1955365 14437771 ~ 14438606 (+)
G12351 NA other upstream 2756970 13635442 ~ 13637001 (+)
G12349 NA other upstream 2762174 13631285 ~ 13631797 (+)
G12348 NA other upstream 2766260 13621879 ~ 13627711 (+)
AMCG00016329 NA other downstream 81011 16484355 ~ 16486003 (+)
G13012 NA other downstream 713449 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 1159074 17562418 ~ 17599581 (+)
AMCG00016407 NA other downstream 2015673 18419017 ~ 18473689 (+)
AMCG00016429 lamtor1,LOC106581407 other downstream 3471712 19875056 ~ 19879725 (+)

Expression


Co-expression Network