AMCG00016333



Basic Information


Item Value
gene id AMCG00016333
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 16576609 ~ 16586666 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00016333
ATGATGCTGTTCGTCCTGAGGAGCAAGCCCTCTTTCAGAGAGACCCCCCGCTACATCCTGTTCACCCACATGCTCCTCAACGACGCCATTCAGCTGCTGACCAGTATGTTACTGTACACCCTTGCCTTGCTGTATCTGTGCCTTGTCAGGGCTGTGTGTGCAGTCATTGTACTACTGTCCAGCACCACCTTCTATAACGCACCTCTAAACCTTGCTGTGATGGCTCTTGAACGCTACATAGCTATCTGCTTCCCACTGCGGCACAGTGAGATGGCTACCCCTCAAAGAACTGGAGTTGCCATTACTGTGGTTTGGTTTCTTGGCTCTGTAAACCACCTCATTGATATATTTGTTGCTCTGATCACAGAACCCTCTTTTTTACTGACACCTGTGTATTGCACACGTGAACagattttcatgtttaaatggcaGGCCGATGCCTATCAAGGAttcacagctttttattttgtgtctgtggGACTCATTCTGGTGTTCACGTATGTTGCAATCATGCTGGAGGCCAGGTCTGTCTCCTCTGACAAAGCTTCAGTGACCAAGGCCCGCAATACAGTGTTACTGCACACAATCCAGCTGTGCCTGTGCCTCACCTCCTTCCTGTACGGAGTGATAGAAGCCCTGCTGGCAAGGATGGATGCGTCTGTTTTCATTCACCTGCGCCAGGATCAGCTTTGCCACCTGGCCCGAAACTGCGGCCACAGCTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00016333 True 723 mRNA 0.50 2 16576609 16586666

Neighbor


gene id symbol gene type direction distance location
AMCG00016331 NA coding downstream 68202 16504216 ~ 16508407 (-)
AMCG00016332 NA coding downstream 89729 16486461 ~ 16486880 (-)
AMCG00016325 rab30,LOC107670675 coding downstream 131121 16435492 ~ 16445488 (-)
AMCG00016326 NA coding downstream 150964 16419874 ~ 16425645 (-)
AMCG00016328 NA coding downstream 167331 16408355 ~ 16409278 (-)
AMCG00016335 NA coding upstream 825 16587491 ~ 16752990 (-)
AMCG00016336 LOC107680719 coding upstream 170749 16757415 ~ 16774872 (-)
AMCG00016344 ppme1,LOC107548200 coding upstream 224370 16811036 ~ 16822370 (-)
AMCG00016343 NA coding upstream 274514 16861180 ~ 16864392 (-)
AMCG00016342 NA coding upstream 289606 16876272 ~ 16880591 (-)
G12868 NA non-coding downstream 108337 16467973 ~ 16468272 (-)
G12867 NA non-coding downstream 108790 16467617 ~ 16467819 (-)
G12838 NA non-coding downstream 352881 16223485 ~ 16223728 (-)
G12814 NA non-coding downstream 735817 15837835 ~ 15840792 (-)
G12812 NA non-coding downstream 740141 15835194 ~ 15836468 (-)
G12894 NA non-coding upstream 9012 16595678 ~ 16596220 (-)
G12897 NA non-coding upstream 22052 16608718 ~ 16608944 (-)
G12902 NA non-coding upstream 37017 16623683 ~ 16623906 (-)
G12915 NA non-coding upstream 163053 16749719 ~ 16749919 (-)
G12921 NA non-coding upstream 204757 16791423 ~ 16791669 (-)
AMCG00016327 NA other downstream 101439 16470611 ~ 16475170 (-)
AMCG00016293 NA other downstream 1784640 14785198 ~ 14791969 (-)
AMCG00016281 NA other downstream 2149319 14420356 ~ 14427290 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 3017425 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 3706049 12849878 ~ 12870560 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 271875 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 279652 16866318 ~ 16870002 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other upstream 676935 17263601 ~ 17266747 (-)
AMCG00016376 NA other upstream 951368 17538034 ~ 17541342 (-)
G13367 NA other upstream 2504573 19091239 ~ 19105381 (-)

Expression



Co-expression Network