AMCG00016334


Basic Information

Item Value
gene id AMCG00016334
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 16506297 ~ 16520198 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016334
attttgatCTAGGTGATGCTTTACATGACTTTGGAgTTTTCCTCTATGTGAACTGTCTCATGATCTTCACATTCTTCAAAAAAGAAGCTTTTCGCACAAATATGATTCAAAACACCACGGACAATAACAATGTCAGCATTGTGACTTCCACTCTACCAGTGTTGAATGTGAAGATGTGGATTGTACAGGTACTGGTTGTGTTTTTCCTCTATGTGAACTGTCTCATGCTATTCACCTTCTTCAAGAAGGAAGCTTTCCGGACAACCACGCggtacattttgtttgcacaAACACTACTTGTGgactctttctttcttgtgcTGATAGATATTGTCATTCTGTTGACTTATTTCTATGACCTAGTTCCTGTAGgactttgcattttattgtgcGTGTTTATAGAAATTCTTACAAATACCACACCAATGAGCATCACTGCAATGTGTCTGGAACGCTACATTGCCATCTGTATGCCACTGAGACACGCAGATATTTCTACCACAAGCAGGCTGATAAAAGGAATTCTTATTATTTGGGCTCTGGGTTCCTTTTATGCCTTTATCGATCTCTGCATTCTTGTTGCATTTACATCTGCAAGTTTTTATACAGAAAAAACTAAGTGCAGTTATGATATAATACTTCAGAAGGAATGGCAAACCCAAATGAGGATAATACATTGCCAGGTGGATTTCCTGATCATGGGGGTGATCCTTGTATTctgttatatacaaataatgaaagcaGCTAAATCTGCTTCAGTGGATAACAAGAAATCGTCATCCAAAGGCACcaaaacattgcttttacatTCACTGCAGTTGCTCCtctgtttaattgaattgtggTGCCCATTTATAGAAATGTCTGTTCTGCACATAAACTTGCAAATGTTCATATCTGTAagatatttcaatttcattGCTTTTACATTAGCTTCCAGGTGGGAGTCCCGGAAGGGGCATCATGGCGGCGGCCTGAACCCTCTGGGCGTGCATCCCGGCGTGCTCGAGGTGCAGGCCCCCAGCCTGGAGAGGGAGGACCAGTCCCTCTCCAAAGCGGACGGTGCAGGCCCAGAGATCAAGCAGGCTTCCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016334 True 1094 mRNA 0.42 4 16506297 16520198

Neighbor

gene id symbol gene type direction distance location
AMCG00016330 NA coding upstream 22355 16465451 ~ 16483942 (+)
AMCG00016323 pcf11 coding upstream 44982 16446628 ~ 16461315 (+)
AMCG00016322 NA coding upstream 71248 16430090 ~ 16435049 (+)
AMCG00016324 NA coding upstream 102953 16393971 ~ 16403344 (+)
AMCG00016314 NA coding upstream 669336 15824997 ~ 15836961 (+)
AMCG00016337 NA coding downstream 37040 16557238 ~ 16563218 (+)
AMCG00016346 NA coding downstream 215906 16736104 ~ 16740028 (+)
AMCG00016340 NA coding downstream 263268 16783466 ~ 16786942 (+)
AMCG00016339 NA coding downstream 274099 16794297 ~ 16807272 (+)
AMCG00016338 NA coding downstream 302719 16822917 ~ 16849192 (+)
G12816 NA non-coding upstream 581572 15919583 ~ 15924725 (+)
G12763 NA non-coding upstream 762650 15741186 ~ 15743647 (+)
G12712 NA non-coding upstream 1041985 15464077 ~ 15464312 (+)
G12605 NA non-coding upstream 1890588 14576587 ~ 14615709 (+)
G12591 NA non-coding upstream 2054543 14451510 ~ 14451754 (+)
G12886 NA non-coding downstream 12906 16533104 ~ 16533381 (+)
G12896 NA non-coding downstream 88520 16608718 ~ 16608985 (+)
G12901 NA non-coding downstream 103485 16623683 ~ 16623967 (+)
G12906 NA non-coding downstream 151934 16672132 ~ 16672496 (+)
G12907 NA non-coding downstream 154695 16674893 ~ 16675189 (+)
AMCG00016329 NA other upstream 20294 16484355 ~ 16486003 (+)
AMCG00016288 NA other upstream 1722762 14745316 ~ 14783535 (+)
G12587 NA other upstream 2067691 14437771 ~ 14438606 (+)
G12351 NA other upstream 2869296 13635442 ~ 13637001 (+)
G12349 NA other upstream 2874500 13631285 ~ 13631797 (+)
G13012 NA other downstream 596595 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 1042220 17562418 ~ 17599581 (+)
AMCG00016407 NA other downstream 1898819 18419017 ~ 18473689 (+)
AMCG00016429 lamtor1,LOC106581407 other downstream 3354858 19875056 ~ 19879725 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other downstream 5261908 21782106 ~ 21832148 (+)

Expression


Co-expression Network