AMCG00016335


Basic Information

Item Value
gene id AMCG00016335
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 16587491 ~ 16752990 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016335
ATGCGCAACTCTGTGTTTGTGCAAAACCTGGTGCAAGCTAGCGACGGTCCAGTTCTTGATGTACTCCGACTTCCTTGTCCTTTGCAGACCTCATTGGTAAAGCCTAGGGCTCGTGGCTACGACGGCAGCGTGCGCTTACCTGTGGGGCTCGTGGTGGTCCCAGCTAACACACCCTTCATCCTGGCCACCATGTCTCTGGAGCGCTACATCGCCATCTGTTACCCCCTGAGGCACAAGGAGATCTGCCGAGTGGACAGGACCTGGGTCGTCATCCTGGCACTGTGGCTGACGAGCTGTATCATTCCCACCATCAATTTTGCTTTGGTGGGCTCTTACTCCATTGATGTGTACTCCACCCCGGTTACTTGCATGACAAAGCTCCTCAACTCCTCCCACATTCAAAAGCTCTTCAAAGTCTCGGTGAATGCCTTGTTTCTTGCTCTGGTCGCCACCGTGATCCTGTCCACCTATGTCAGGATACTGCTCAAGGCCAAGAGGATGCGGTCTGACAAGGCCCCTGTGAACAAAGCCCTGCACACTGTCATTCTGCACGGCGTCCAGCTGCTGCTCTGCATGATGTCTTACACTTATCCAGTCACAGAGGGCCTCATAGTGGTTCAAGTGGGGTGGCTCAGGGAACACATCTCCTTCTTCAACTACTTCTGTTTCATTCTCCTGCCCCGTTTCCTCAGCCCCCTGATCTATGGCCTGCGAGACGAGAACCTGAGAgctgAGCCAATCCAGGCTCCAGACCTCCGGGCTTCAAAGGGACCCCGTCTCCGCCGGCACTGCAAGCTAACCCCCGAGATGGAAAACATAACAGAATATTTGAACAACACTGTACCACAGCGAGCACTGCAGGATGAGCTAAACACTGGGATACTGGTGAAAGTAATGTTTTCCATGACACTGTGTCTTATCTTCCTCTATGTGAACGGCATCATGCTCTTCACCCTGAGCACAAAAAACACCTTCAGAGAGACTTCGCGCTACATCCTGTTTGCTCACATGCTCTTCAATGATTCCATACAGCTGCTGACGAGTACGCTGCTGTACATCTTTGCATCAGTCAACCTGTATCTTCTCACTGAACTGTGTCTGCTGCTCTGTACCAACACCATATCTCACAATAAAGGTTTGTTGATAAGATTGAGCCGGCATAGCAATCTTGCCGGTGCGGACTATCGctttattttggcacaaacTCTGGGCGAACATTATGATGAAGATGAGGTGGTTCAAGACGTGGCCGTTTTGGACCCACTGTATGATAACCCTAAGGAGGTAGAGGATGATGACGAGGATGGACGATGGGCCGCTGGGGCCGATTATGGCAGCCCTGTCACCTGTCTGCTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016335 True 1359 mRNA 0.52 8 16587491 16752990

Neighbor

gene id symbol gene type direction distance location
AMCG00016333 NA coding downstream 825 16576609 ~ 16586666 (-)
AMCG00016331 NA coding downstream 79084 16504216 ~ 16508407 (-)
AMCG00016332 NA coding downstream 100611 16486461 ~ 16486880 (-)
AMCG00016325 rab30,LOC107670675 coding downstream 142003 16435492 ~ 16445488 (-)
AMCG00016326 NA coding downstream 161846 16419874 ~ 16425645 (-)
AMCG00016336 LOC107680719 coding upstream 4425 16757415 ~ 16774872 (-)
AMCG00016344 ppme1,LOC107548200 coding upstream 58046 16811036 ~ 16822370 (-)
AMCG00016343 NA coding upstream 108190 16861180 ~ 16864392 (-)
AMCG00016342 NA coding upstream 123282 16876272 ~ 16880591 (-)
AMCG00016348 NA coding upstream 176438 16929428 ~ 16938560 (-)
G12868 NA non-coding downstream 119219 16467973 ~ 16468272 (-)
G12867 NA non-coding downstream 119672 16467617 ~ 16467819 (-)
G12838 NA non-coding downstream 363763 16223485 ~ 16223728 (-)
G12814 NA non-coding downstream 746699 15837835 ~ 15840792 (-)
G12812 NA non-coding downstream 751023 15835194 ~ 15836468 (-)
G12921 NA non-coding upstream 38433 16791423 ~ 16791669 (-)
G12978 NA non-coding upstream 165576 16918566 ~ 16924672 (-)
G13045 rps3 non-coding upstream 488954 17241944 ~ 17246330 (-)
G13065 clns1a,LOC102781126 non-coding upstream 531413 17284403 ~ 17286829 (-)
G13091 NA non-coding upstream 622276 17375266 ~ 17377539 (-)
AMCG00016327 NA other downstream 112321 16470611 ~ 16475170 (-)
AMCG00016293 NA other downstream 1795522 14785198 ~ 14791969 (-)
AMCG00016281 NA other downstream 2160201 14420356 ~ 14427290 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 3028307 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 3716931 12849878 ~ 12870560 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 105551 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 113328 16866318 ~ 16870002 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other upstream 510611 17263601 ~ 17266747 (-)
AMCG00016376 NA other upstream 785044 17538034 ~ 17541342 (-)
G13367 NA other upstream 2338249 19091239 ~ 19105381 (-)

Expression


Co-expression Network