AMCG00016337


Basic Information

Item Value
gene id AMCG00016337
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 16557238 ~ 16563218 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016337
GAAAGCTAACCCCCGAGATGGAAAACATAACAGAATATTTGAACAACACTGTACCACTGCGAGCACTGCAGGATGAGCTAAACACAGAGATTCTGGTGAAAGTAATCTTTTCCATTACACTGTGTCTCATCTTCCTCTATGTGAACGGCATCATGCTCTTCACTCTGAGCACAAGAAGCACCTTCAGAGAGACATCGCGCTACATCCTGTTTGCTCACATGCTCTTCAATGACTCCATACAGCTGCTGACCAGTATGCTGCTGTACATCTTTTCATCAGTCAGCCTACATCTTATCACTGGTGTGTGtgccattctttttttaattgcaagcaTCACTTACTGCAACTCACCACTGAATCTTGCTATAATGGCTCTTGAAAGGTACATAGCAATCTGCTTCCCTCTGAGACACAGTGAAATAGCTACGCCAAAGAGAACTGGAATGGCCATAGGTGTGATATGGTTCTTTGGCAGCATGAATGACATTATTCGCATCatgatcattttaattacagaaccCTTATACTTCTTGTCTTCTGTGCATTGCACAACGAAAAAACTTTTCAGGAGAAAAATGCTTTTAGATGTGAGCACAGCAttcacagcactgtattttGTGGCACAAGTACCTGAAAATGAGCTCAATGTGGGGCTGTTAGTGAAAGCACTCCTGTCCATGACACCATGTCTGATCTTCCTCTATGTGAACGGAATCATGCTCTTCACCCTGAGCACAAGAAGCACCTTCAGAGAGACATCGCGCTACATCCTGTTTGCTCACATGCTCTTCAATGACTCCATACAGCTGCTGACCAGTATGCTGCTGTACATCTTTGCATCAGTTGAGCTGTATGTTCTCAATGGTCTCTGTGTTGTCTTCATTATAGCTGCGAGAACCACCTTTTGTAACTCGCCACTTAATCTTGCTGTGATGGCTCTTGAAAGGTGCTTAAGCCCATTAATATATGGTCTAAGAGATGAGAGCTTCAGACCACTTGTGAAATACTATTTGACTTTTGGCTTGAAAAGCAGAGTAAAGCCCCATTTAGTCACTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016337 True 1058 mRNA 0.43 3 16557238 16563218

Neighbor

gene id symbol gene type direction distance location
AMCG00016334 NA coding upstream 37040 16506297 ~ 16520198 (+)
AMCG00016330 NA coding upstream 73296 16465451 ~ 16483942 (+)
AMCG00016323 pcf11 coding upstream 95923 16446628 ~ 16461315 (+)
AMCG00016322 NA coding upstream 122189 16430090 ~ 16435049 (+)
AMCG00016324 NA coding upstream 153894 16393971 ~ 16403344 (+)
AMCG00016346 NA coding downstream 172886 16736104 ~ 16740028 (+)
AMCG00016340 NA coding downstream 220248 16783466 ~ 16786942 (+)
AMCG00016339 NA coding downstream 231079 16794297 ~ 16807272 (+)
AMCG00016338 NA coding downstream 259699 16822917 ~ 16849192 (+)
AMCG00016341 LOC103026990,LOC108277383,LOC108433282,LOC107743402,LOC107697442,LOC107578242,LOC100702672,LOC107653753 coding downstream 288275 16851493 ~ 16862051 (+)
G12886 NA non-coding upstream 23857 16533104 ~ 16533381 (+)
G12816 NA non-coding upstream 632513 15919583 ~ 15924725 (+)
G12763 NA non-coding upstream 813591 15741186 ~ 15743647 (+)
G12712 NA non-coding upstream 1092926 15464077 ~ 15464312 (+)
G12605 NA non-coding upstream 1941529 14576587 ~ 14615709 (+)
G12896 NA non-coding downstream 45500 16608718 ~ 16608985 (+)
G12901 NA non-coding downstream 60465 16623683 ~ 16623967 (+)
G12906 NA non-coding downstream 108914 16672132 ~ 16672496 (+)
G12907 NA non-coding downstream 111675 16674893 ~ 16675189 (+)
G12929 ppme1,LOC107715282 non-coding downstream 252359 16815577 ~ 16816331 (+)
AMCG00016329 NA other upstream 71235 16484355 ~ 16486003 (+)
AMCG00016288 NA other upstream 1773703 14745316 ~ 14783535 (+)
G12587 NA other upstream 2118632 14437771 ~ 14438606 (+)
G12351 NA other upstream 2920237 13635442 ~ 13637001 (+)
G12349 NA other upstream 2925441 13631285 ~ 13631797 (+)
G13012 NA other downstream 553575 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 999200 17562418 ~ 17599581 (+)
AMCG00016407 NA other downstream 1855799 18419017 ~ 18473689 (+)
AMCG00016429 lamtor1,LOC106581407 other downstream 3311838 19875056 ~ 19879725 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other downstream 5218888 21782106 ~ 21832148 (+)

Expression


Co-expression Network