AMCG00016341 (LOC103026990,LOC108277383,LOC108433282,LOC107743402,LOC107697442,LOC107578242,LOC100702672,LOC107653753)


Basic Information

Item Value
gene id AMCG00016341
gene name LOC103026990,LOC108277383,LOC108433282,LOC107743402,LOC107697442,LOC107578242,LOC100702672,LOC107653753
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 16851493 ~ 16862051 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016341
GCTGTATATACATGCTTTGTGTCTGACTACACTTCAGAGATACTCTAAAGGAGTCTTTGACAAGTCCAGTAAACACCTCAGGACACACAAGCGATAAAGGAAATACTGGGTCAGCGTTGTTGATGGTTGATTTCTATTGGATATACTGGATGTAATCACTTATTTCTATCAGGTCGGGGCACAACAGTGCACATCAGCCATATACTGTGCAAGGACCATCACTATCTGATCACCTCTACATCTACAGGGCTGCTGGGAAAATGGTTGGAATGAAGCCCACAGACATGGCTCCCACCGCCACTGTGAAATTCTTCGGGGCTGGGACAGCTGCATGCATTGCTGATCTGGTCACCTTTCCCTTAGATACAGCCAAAGTCAGGCTGCAGATCCAAGGGGAGTCCAAGCCAACGGATGGCAGCAAAGTCATGAAGTACAGGGGAGTGTTTGGCACCATCACCACCATGGTGAGGACCGAGGGGCCGAGGAGTCTATACAACGGGCTGGTGGCCGGGCTGCAGCGCCAGATGAGCTTTGCCTCTGTGCGAATCGGGCTCTATGATTCCATGAAGCAATTCTACAACAGAGGAACCAACCGGGCAATGGCTGTCACTTTTGCACAGCCCACTGACGTGGTCAAAGTCCGGTTTCAAGCTCACGTCAGACTGGCAGATGGCAACAAAAGATACAGCGGGACAATGGATGCCTACAAGACCATTGCCAGGGATGAGGGCATCAAAGGGCTGTGGAAAGGAACCCTCCCTAACATAACAAGGAATGCAATTGTGACCTGCGCAGAGGTGGTGACATATGACATCATCAAGGAACTCATACTGAAATACAACCTCATGACTGACAATGTGCCGTGTCATTTCACTGCTGCGTTTGGGGCTGGCTTCTGCACCACCATCGTGGCGTCCCCCGTGGACGTGATCAAGACGCGATTCATGAACTCCACACCCGGGCAGTACAGCAGTGCTCTGAAGTGCGGCTTCATCATGCTCACCAAGGAAGGCCCCACAGCTTTCTATAAAGGGTTCATGCCCTCCTTTCTCAGACTGGGATCCTGGAACATCGTGATGTTTGTTTCCTACGAGCAGATTAAAAGAGCCATGAATTTGGATTATGCTTTTTAAGTGTTTCGTTTCTGGACGTGTTTCTATGGAACCACAAGAGAACCAGATCATAGTTGAAAGTAATTTCAACGAGAGGGACGCCTTCAGAGAATCCTGATCCTGGACCTCGCCATCCGCGCCGGACTCCCGTTCTGTTCTGCACGTTCCCCAATAACTTGGTGATCATGGTTGGATTCGGGCCCGCTGATGTCCCCCCTACGGCTGCAGTGAAGTTCATTGGCGCTGGTACTGCCGCCTGCATTGCAGACCTCTTCACATTCCCCCTCGACACGGCCAAAGTCAGGCTCCAGatccaaggagaatccaaagcCGCTGCTCCCAATGTCAAATTGGTGAAATACAGTGGTGTGTTTGGCACCATCAACACCATGGTGAAGACTGAGGGGCCGAGGAGTCTGTACAACGGGCTGGTGGCTGGGCTCCAGCGCCAAATGAGCTTTGCCTCTGTCCGTATCGGACTCTATGATTCGGTCAAACAGTTCTACACCAAAGGAGCCGAGCATGCTGGGATTGGCAGCCGTCTGCTAGCTGGCTGCACCACTGGTGCGATGGCTGTGGCCATGGCCCAGCCCACTGATGTGGTGAAGGTGCGATTCCAGGCCCAGGTTGGCACGGCCAGTGGCAACAAGCGATACCAAGGGACCATCGACGcttacaagaccatcgccaggGAGGAGGGCATACGTGGCCTGTGGAGAGAGGAACTACACCAAATATCGCCCGCAATGCCATCGTGAACTGCACTGAACTAGTGACCTATGACCTTATCAAAGATGCTCTCCTGCGATCCACCCCAATGactgATACCCTTCCATGCCACTTCACATCTGCTTTTGGTGCGGGTTTCTGCACCACTGTGATTGCTTCCCCTGTGGATGTAGTGAAAACAAGATACATGAACTCTGGGCTCGGCCAGTACAGCAGTGCCTTGAACTGTGCACTCGCCATGTTGACGAAGGAGGGGCCCATGGCCTTCTATAAAGGGTTCATGCCCTCTTTCCTGCGTCTCGGCTCCTGGAACGTGGTGATGTTCGTCACCTATGAGCAGCTGAAACGTGCTATGATGGCGGCCCGCCACAACTGGGCCTCTCCTCTGTGAATGTCCCTGTAGTGCCAGTGCTACTTTCTGCACTTTTCTTGTCTGTGCTGTAGCATTTTACCATTTTGGTTTTAGTTGGGTTTTAAACTAACATGTAAAAGCTGGTCTTTTAGGTTTAGTCATCTTAATCTCTTACAATAAAGATTCCTCAAGACTGTCTGGCTTGCTGTAAAATGGGTATAAAACCTGTCTAGGTTAGATTTTTAATTCCTATTGCTAGCCTGAAGCAATTGTGGTACAAATAAAATCTTTTCACAAAATTGTCTCTGTACTTTTTGGTTACATCTGTACTAAAAGATGCTGGGTTTACTAATGAGCAGCAAAGCAACACTTATATTGCATGAGTTGTCCAGTCCCTCCAGAGAGCTTATGTGATCCACTTCATATTGGTTGGATTGGACTACCTACATAACgtgaggatttaaaaatataaccgCTATGTCTGTTTGGGTGAAGACCAGTTTCAGGATGAAACTACTAAACTTCAGGGAAATATGATTTGAATTGTAGGCAACTTCAAATAAAGTGCTGACGGCCACAGGTTAGCCTAGATGGGGGAGGATAAATGCACACCATACTCTTTAAGAACAAATCCTTTATTTGTGAGGAGGATAACAATTGTCACATGTATTCAAGCCAACACTTTGCATACATTCATCCGCCTTGTTAGAATGAAAGCTACTCTAAAGTAATGCAAGAGGACACTATATGAAGGCCACAGGGTACAGTATAACGTGGTTATACAACACCTGATTGTTTCCAAAGATGCTGCATGTGATTCAAAGGGTGAGGGCTTGTTTTAGGAGTTGCTTCTTTTCTGATGTGAGCTTCTCTGGGAAGTGAATCTCAAACTGAATAATGAGATTGCCTTTAAGGCTGGGATTTCTGATTAATGGCATTCCTTCACCGGGAACCACTTTTGTATACTTTGGGCTAGGAGAGAAGGAGAATGTaagttattacattaaaattttCACAAATGTCCTGCTGTGGTAAATCAGGATCAGCATAATACTATGAATAATAAATCTTGTGtggatgtatatataaactttttttttttgttctaattgtaatgtaattctGTATGAGCCAGAGATTACCCATCTGTAacaacattcatatttcatatgaTTATGTTGGTTGTCTGTGGTGGAGTCTAGTATGTAACTTAAGGCTAGTTTCTGCA

Function

NR:

description
mitochondrial uncoupling protein 2-like

GO:

id name namespace
GO:0006839 mitochondrial transport biological_process
GO:0031966 mitochondrial membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15103 UCP2_3, SLC25A8_9; solute carrier family 25 (mitochondrial uncoupling protein), member 8/9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016341 True 3421 mRNA 0.47 15 16851493 16862051

Neighbor

gene id symbol gene type direction distance location
AMCG00016338 NA coding upstream 2301 16822917 ~ 16849192 (+)
AMCG00016339 NA coding upstream 44221 16794297 ~ 16807272 (+)
AMCG00016340 NA coding upstream 64551 16783466 ~ 16786942 (+)
AMCG00016346 NA coding upstream 111465 16736104 ~ 16740028 (+)
AMCG00016337 NA coding upstream 288275 16557238 ~ 16563218 (+)
AMCG00016347 NA coding downstream 20653 16882704 ~ 16922938 (+)
AMCG00016349 fam168a,LOC107600264,LOC107594362 coding downstream 106381 16968432 ~ 17007785 (+)
AMCG00016356 fchsd2,LOC107600282,LOC107594367 coding downstream 340955 17203006 ~ 17232829 (+)
AMCG00016355 NA coding downstream 371225 17233276 ~ 17240318 (+)
AMCG00016359 rps3,LOC102795110 coding downstream 379828 17241879 ~ 17246793 (+)
G12929 ppme1,LOC107715282 non-coding upstream 35162 16815577 ~ 16816331 (+)
G12907 NA non-coding upstream 176304 16674893 ~ 16675189 (+)
G12906 NA non-coding upstream 178997 16672132 ~ 16672496 (+)
G12901 NA non-coding upstream 227526 16623683 ~ 16623967 (+)
G12896 NA non-coding upstream 242508 16608718 ~ 16608985 (+)
G12966 NA non-coding downstream 14294 16876345 ~ 16876902 (+)
G13019 NA non-coding downstream 271263 17133314 ~ 17133530 (+)
G13021 NA non-coding downstream 281559 17143610 ~ 17146998 (+)
G13174 NA non-coding downstream 796706 17658757 ~ 17680909 (+)
G13266 NA non-coding downstream 1397217 18259268 ~ 18262343 (+)
AMCG00016329 NA other upstream 365490 16484355 ~ 16486003 (+)
AMCG00016288 NA other upstream 2067958 14745316 ~ 14783535 (+)
G12587 NA other upstream 2412887 14437771 ~ 14438606 (+)
G12351 NA other upstream 3214492 13635442 ~ 13637001 (+)
G12349 NA other upstream 3219696 13631285 ~ 13631797 (+)
G13012 NA other downstream 254742 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 700367 17562418 ~ 17599581 (+)
AMCG00016407 NA other downstream 1556966 18419017 ~ 18473689 (+)
AMCG00016429 lamtor1,LOC106581407 other downstream 3013005 19875056 ~ 19879725 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other downstream 4920055 21782106 ~ 21832148 (+)

Expression


Co-expression Network