AMCG00016354


Basic Information

Item Value
gene id AMCG00016354
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 17145993 ~ 17146985 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016354
ATGATGGCTGTCTCAAACAAGACCACGTTGAACCAGAGCAGCCCATACAAATGCCAATTAGATGAAAACTTCAAGTACATTCTCCTGCCAACCAGCTATGGACTTGTCTTCGTCATCGGCCTGGTGCTCAACATCATGGCCATGTATGTCATTGTCTTCCGCACAAAGCACTGGAAGCCGAGCACAATTTACATGTTCAACCTGACTGTCTCGGACACCCTGTACATCCTGACGCTGCCCTTCCTGGTGTATTACTACGCTGATGCCAGTGACTGGCCCTTCAGCGAACCCTTATGTAAAATCATCCGCTTCCTCTTCTACGCGAACCTCTACACCAGCATCCTCTTCCTGTCCTGTATCAGTATTCACCGCTTCCTGGGCGTCTGTTATCCCATGCAGTCACTGCAGTGGGTGAGCACGCTCAGGGCCCGACTGATCTCGGTGGGGGTGTGGGTCACCATCATGTCCTTCCAGTCGCCCATCTTGTATTTCTCCCGCACCACAACGTCGGGCCAGAAGGTTTGCTACGACACCACCAGCATTGAGCTCTTCAATGACTTCCTGGTGTACAGCTCCATCATCTCCGTGGTGCTGTTCTGCATCCCTTTCATGGTGGTTGTGGTTTGCTACTGCCTGATGGTGAAGAAGCTGTTGGAGCCCAGTGCGGGGGGGGCCTCCTCTTTGAAGTCCAAGCAGAAGTCCATCAAGATGATCATCATTGTCCTGGGCGCAttcatgatctgcttcctgcccTTCCACCTCACTCGGACACTCTACTACATGTTCAGGTACATGGATGTCAGCTGTACCGCTCTGCAAGGTGCCAGCATTGCTTACAAGGTCACAAAGCCCCTTGCCAGTGCCAACAGCTGCCTGGACCCCATTTTGTACTTCCTGGCAGGGCAGAGCTTTCGCAAGAATTTCACCACcaggaaaaggaaaagctgCTCTCCGAATGTAATCTGTGAAAAGACATCTTCAACTCAACTGTGA

Function

GO: NA

KEGG:

id description
K04269 P2RY2; P2Y purinoceptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016354 True 993 mRNA 0.52 1 17145993 17146985

Neighbor

gene id symbol gene type direction distance location
AMCG00016352 NA coding downstream 22754 17122706 ~ 17123239 (-)
AMCG00016353 NA coding downstream 28258 17103974 ~ 17117735 (-)
AMCG00016351 LOC106613240,LOC107600776,LOC107577125 coding downstream 74546 17040305 ~ 17071447 (-)
AMCG00016350 NA coding downstream 122899 17009731 ~ 17023094 (-)
AMCG00016348 NA coding downstream 207433 16929428 ~ 16938560 (-)
AMCG00016361 NA coding upstream 146103 17293088 ~ 17294875 (-)
AMCG00016368 myo7aa,myo7a,LOC107660700,LOC106581013 coding upstream 233446 17380431 ~ 17413600 (-)
AMCG00016367 capn5b,LOC108440168,LOC107706463,LOC107548164,LOC101464883 coding upstream 280519 17427504 ~ 17460486 (-)
AMCG00016369 dcun1d5,LOC106612886,LOC107600360,LOC107712802 coding upstream 319698 17466683 ~ 17472931 (-)
AMCG00016375 cul5,LOC107714978,LOC107554266 coding upstream 328433 17475418 ~ 17490419 (-)
G12978 NA non-coding downstream 221321 16918566 ~ 16924672 (-)
G12921 NA non-coding downstream 354324 16791423 ~ 16791669 (-)
G12915 NA non-coding downstream 396074 16749719 ~ 16749919 (-)
G12902 NA non-coding downstream 522087 16623683 ~ 16623906 (-)
G12897 NA non-coding downstream 537049 16608718 ~ 16608944 (-)
G13045 rps3 non-coding upstream 94959 17241944 ~ 17246330 (-)
G13065 clns1a,LOC102781126 non-coding upstream 137418 17284403 ~ 17286829 (-)
G13091 NA non-coding upstream 228281 17375266 ~ 17377539 (-)
G13126 NA non-coding upstream 346870 17493855 ~ 17494346 (-)
G13129 NA non-coding upstream 348938 17495923 ~ 17496347 (-)
AMCG00016345 NA other downstream 275991 16866318 ~ 16870002 (-)
G12945 ucp2,ucp2b,LOC106567822 other downstream 284814 16858541 ~ 16861179 (-)
AMCG00016327 NA other downstream 670823 16470611 ~ 16475170 (-)
AMCG00016293 NA other downstream 2354024 14785198 ~ 14791969 (-)
AMCG00016281 NA other downstream 2718703 14420356 ~ 14427290 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other upstream 116616 17263601 ~ 17266747 (-)
AMCG00016376 NA other upstream 391049 17538034 ~ 17541342 (-)
G13367 NA other upstream 1944254 19091239 ~ 19105381 (-)
AMCG00016453 NA other upstream 2981923 20128908 ~ 20135547 (-)
AMCG00016479 NA other upstream 3469524 20616509 ~ 20636960 (-)

Expression


Co-expression Network