AMCG00016365


Basic Information

Item Value
gene id AMCG00016365
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 17462090 ~ 17465989 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016365
aatacaGGAAGATGCGCGTCAGCCTCCTGACAAGACCTGGACTACTCTTGCTGTTTTACTCATTGAACTCGACCAGTGGTCTTTCTGTGACGAACTGGGTGGCTCCATGCCAATGGGACTGGACTGGGGCTAATAACCTGACAGTAAACTGCACTGACAGGAGTCTGGAGGCCCCTGTCCCTGCCAGCCTGCCAGCCCAGGCCTATGCCATTGAGCTCAGTTTAAACACCATCACTCACATCAGACGGTCACACTTCCCTGTCCAGCCGCTGCAGGCAGTCAGACTCAACCTCAGCAACAACAGGATTGGGGAAATCCAAGACTGGGCTTTTGGGTGCTTCGTGAAGCTGGAAGTGCTTGACCTGAGCAGTAACAGGCTCAGCACCCTCGGGAGGGACACTTGGTGGAGGCTTGGCAACCTGAAGGAGCTGCGTCTGGGACACAATGTCATAAAGACAGTTCACAGCTCTTCATTTGCAAGCCTCGTCAGAGCAGAAACACTGTGGCTGCAGAATAACAGCCTCGTTAACATCCCGCAAGCAGTGAAGAGGATGTCTTCTCTCCGagtcctctctctcgctcagaATCGGATCTTCTCTGTTGATTCTGGAAGTCTCCAAGGCTGCTCAGACCTGGCTATACTGCAGCTGGAGCACAACCTAATCTCCAGAGTGTCAAAAGATACCTTTGAGGGCCTTGACAAACTGAAGGTAATGACAGGGGGGCCCAGAGTTACAGAAGACCACCATCCTCAGACCGCTTttagacagaaaatattaagagacagaaatGTGCTAAACCTGAGCTTCAACATGCTCCAGACCACACAGCCTGCTGCCTTTGAGAAGCTTTGGGACCAGGATGCAGATGTAATGATAGATGGCAACCCCTGGAGGTGCGATTGTAAGCTGAAGGAGCTGCGAGAGCTGGCACCCACACTGCTGTCTGACCAAGTCCAGTGTCAGGGAGGTCCACTGCACGGCTTTCAACTGTCCGCACTGAGACCAGAGCAGCTGCAGTGCAGTCGGCCCCTCGTGGTGCTAAACGCCATCACTATTCAGCTGCCTGCGGACAGAAGTTCAAAACTGCCATGTACAGCAAACGGTCTGAAAGGTCAAGTTCTGTACTGGGAGACTCCATTTGGGCGACTGCGGAATAACTACCTTTACGGCACTCTGGATCCGGTTACGGTGCTGCGAGATGGAAGTTTACAGATTACAAAGTCTGCCCTCTATCACACTGGGCTGTATTACTGCTTCTTGAGTGACAGGGAACGAAGAGCGATAATCCCCTACCGAACTGATGTCAGGGAGAGGAGTAACAGAGAGGCCAGACTCCGCAACAAAAGAGAAACCAGTACAGATCCAGAGACGGTCTCCGAAGAGCTCTTTATTTCTATAGTCACCATTTCGGTCTTGGTTGCTGCCTTAGTGGGTTTTGTTCTTGGTGCCTTCAGCAGGTCGTACTTCAATAAGTACTGGAGACAAATAAAGCAAAGGCAAGTTGTCAGAGATGATCCAACCATGAATTTGGAACCCCTCAcaagacaacacaaaaacatggaTTTGAGTGAGGAACGCATAGGTACAGCCAATAAGACTAGAATCTATGAGACACTTTCACAAGCCAAGAGGGCAGAGCAGGGCATCTCCCCCTCTGAAGGCACTCGGGCTGGGCATGTTTCTGTTGAAGGCGAGTTGCCCGGTGTTTCCGGAGAGGGTTGTGTGGCTCCCTGGCGGCCATATGCTACGCTGAACTCGGATGCACAAACTGCAAAGTGGGTGACCTTTGACAGTAGCACAGGTAACACAGTGCCAGCCTGGGAGTTCAGCACTGAATCAGGAACTACCGAATATCCCCAACTGGTGTTCCCTCACAGCCCAGACATCGCTGAGGAGACACCCTGTGAGGAAAGAAAGATGTTCCCAAGTCAAGATTGTTACAGAAGAACTGATTCAGATGCTTCTACTCCAACTTCCTTTCCAAAAACAAGTGTGAAATCTGATGACTTTGGAAACCCAGCAGAAATGGGGGAACACAGCAAGGAAGACGACTACATTGTCTACCCTGTGAAAGACACTTACAGACCCGGTATCGACCCATGGTCCTCTGGTGACAGTTTTGACCATAAATCCATCGTTCCAGAGCAAAGCCAGTACACACCATCAGCAGCACAGATCCTTGAAACACCAggagaaactaaacaaacccaAGTAGATCACTTTGGTTTAGAAAGGAGGCCGAGCGCAGAAGAAATGCTTATTCCACAAGGAGTctctgaggaagaggaggcatCGATGGGATTTTGTATTGATCTTACACAGCTTGCAATGGATGAAGATGCAAGTGACTGCAGAGTGACTCTTGGCGATAGCACAAGTCCTGAGCATACATCTGTGAAAGGCAGCGACACTGAAGAGGGATGGGAAGGCAACAAGGAAACACACGCTGCCAAGGTGAAGGAGAGCGACAGCAACGTGGATTCTAATGGGGAGACAGAGGTTGGAGAGAAGCCAGCTGAACAGGAACAAAGTATGACTCAAGACAACCAGGACTCTCTCACGGCAGCAGACAGCAGGGCCCGGGCCCACTCAGCCAGACGCAGAGTTATTAGGCTCTACAACTATGACGATGAAGGCAAACTCTACGACCATATTAAGGAATCTGAGGAGTACGCTTGCACACCAAGGCAGAAGCAGAGATCACAGTCCCTGACGCGACTCAGTGCCATAATGAATGCAGGGATGGCACCCGACTTCAGCGCGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016365 True 2768 mRNA 0.51 4 17462090 17465989

Neighbor

gene id symbol gene type direction distance location
AMCG00016370 NA coding upstream 22306 17439311 ~ 17439784 (+)
AMCG00016362 NA coding upstream 84774 17355232 ~ 17377316 (+)
AMCG00016364 pak1,LOC101483196 coding upstream 120132 17321342 ~ 17341958 (+)
AMCG00016366 NA coding upstream 173766 17282576 ~ 17288324 (+)
AMCG00016363 NA coding upstream 183367 17266226 ~ 17278723 (+)
AMCG00016371 NA coding downstream 40475 17506464 ~ 17513994 (+)
AMCG00016373 elmod1,LOC106603718 coding downstream 48822 17514811 ~ 17528068 (+)
AMCG00016372 NA coding downstream 62582 17528571 ~ 17532364 (+)
AMCG00016378 NA coding downstream 72098 17538087 ~ 17559799 (+)
AMCG00016380 NA coding downstream 137734 17603723 ~ 17611160 (+)
G13021 NA non-coding upstream 315092 17143610 ~ 17146998 (+)
G13019 NA non-coding upstream 328560 17133314 ~ 17133530 (+)
G12966 NA non-coding upstream 585188 16876345 ~ 16876902 (+)
G12929 ppme1,LOC107715282 non-coding upstream 645759 16815577 ~ 16816331 (+)
G12907 NA non-coding upstream 786901 16674893 ~ 16675189 (+)
G13174 NA non-coding downstream 192768 17658757 ~ 17680909 (+)
G13266 NA non-coding downstream 793279 18259268 ~ 18262343 (+)
G13267 NA non-coding downstream 799213 18265202 ~ 18265406 (+)
G13270 NA non-coding downstream 804044 18270033 ~ 18274439 (+)
G13273 grm5,LOC102779205,LOC106613232,LOC106581415 non-coding downstream 822051 18288040 ~ 18288261 (+)
G13012 NA other upstream 340158 17116793 ~ 17121932 (+)
AMCG00016329 NA other upstream 976087 16484355 ~ 16486003 (+)
AMCG00016288 NA other upstream 2678555 14745316 ~ 14783535 (+)
G12587 NA other upstream 3023484 14437771 ~ 14438606 (+)
G12351 NA other upstream 3825089 13635442 ~ 13637001 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 96429 17562418 ~ 17599581 (+)
AMCG00016407 NA other downstream 953028 18419017 ~ 18473689 (+)
AMCG00016429 lamtor1,LOC106581407 other downstream 2409067 19875056 ~ 19879725 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other downstream 4316117 21782106 ~ 21832148 (+)
AMCG00016502 NA other downstream 6400278 23866267 ~ 23882946 (+)

Expression


Co-expression Network