Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016370 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 17439311 ~ 17439784 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007608 | sensory perception of smell | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016370 | True | 474 | mRNA | 0.61 | 1 | 17439311 | 17439784 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016362 | NA | coding | upstream | 61995 | 17355232 ~ 17377316 (+) |
| AMCG00016364 | pak1,LOC101483196 | coding | upstream | 97353 | 17321342 ~ 17341958 (+) |
| AMCG00016366 | NA | coding | upstream | 150987 | 17282576 ~ 17288324 (+) |
| AMCG00016363 | NA | coding | upstream | 160588 | 17266226 ~ 17278723 (+) |
| AMCG00016357 | ints4 | coding | upstream | 176019 | 17251550 ~ 17263292 (+) |
| AMCG00016365 | NA | coding | downstream | 22306 | 17462090 ~ 17465989 (+) |
| AMCG00016371 | NA | coding | downstream | 66680 | 17506464 ~ 17513994 (+) |
| AMCG00016373 | elmod1,LOC106603718 | coding | downstream | 75027 | 17514811 ~ 17528068 (+) |
| AMCG00016372 | NA | coding | downstream | 88787 | 17528571 ~ 17532364 (+) |
| AMCG00016378 | NA | coding | downstream | 98303 | 17538087 ~ 17559799 (+) |
| G13021 | NA | non-coding | upstream | 292313 | 17143610 ~ 17146998 (+) |
| G13019 | NA | non-coding | upstream | 305781 | 17133314 ~ 17133530 (+) |
| G12966 | NA | non-coding | upstream | 562409 | 16876345 ~ 16876902 (+) |
| G12929 | ppme1,LOC107715282 | non-coding | upstream | 622980 | 16815577 ~ 16816331 (+) |
| G12907 | NA | non-coding | upstream | 764122 | 16674893 ~ 16675189 (+) |
| G13174 | NA | non-coding | downstream | 218973 | 17658757 ~ 17680909 (+) |
| G13266 | NA | non-coding | downstream | 819484 | 18259268 ~ 18262343 (+) |
| G13267 | NA | non-coding | downstream | 825418 | 18265202 ~ 18265406 (+) |
| G13270 | NA | non-coding | downstream | 830249 | 18270033 ~ 18274439 (+) |
| G13273 | grm5,LOC102779205,LOC106613232,LOC106581415 | non-coding | downstream | 848256 | 18288040 ~ 18288261 (+) |
| G13012 | NA | other | upstream | 317379 | 17116793 ~ 17121932 (+) |
| AMCG00016329 | NA | other | upstream | 953308 | 16484355 ~ 16486003 (+) |
| AMCG00016288 | NA | other | upstream | 2655776 | 14745316 ~ 14783535 (+) |
| G12587 | NA | other | upstream | 3000705 | 14437771 ~ 14438606 (+) |
| G12351 | NA | other | upstream | 3802310 | 13635442 ~ 13637001 (+) |
| AMCG00016379 | cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 | other | downstream | 122634 | 17562418 ~ 17599581 (+) |
| AMCG00016407 | NA | other | downstream | 979233 | 18419017 ~ 18473689 (+) |
| AMCG00016429 | lamtor1,LOC106581407 | other | downstream | 2435272 | 19875056 ~ 19879725 (+) |
| AMCG00016490 | atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 | other | downstream | 4342322 | 21782106 ~ 21832148 (+) |
| AMCG00016502 | NA | other | downstream | 6426483 | 23866267 ~ 23882946 (+) |
